Commit graph

262 commits

Author SHA1 Message Date
3f05283f6d
chore(script): Refactor screening flowchart calculations
Made it much clearer and simpler how numbers are calculated for the
screening flowchart. Now we just keep the actual numbers in memory
and not a copy of the whole bibtex library for each calculation step.

Also renamed the bibtex variables to be more sane, `bib_sample_raw_db`
(the raw, unaltered sample returned from querying the databases), and
`bib_sample` for our working sample including database queries and
snowballing studies but already deduplicated (since we can't keep
an unduplicated version on Zotero).
2023-12-09 22:06:05 +01:00
708fa90d29
chore(script): Refactor file top imports 2023-12-09 21:54:26 +01:00
c3b0d8cfd6
fix(script): Fix display of fuller-width figures 2023-12-09 20:41:29 +01:00
a681a5b6ff
fix(data): Fix display of table data linebreak 2023-12-09 20:40:56 +01:00
51132d818d
chore(repo): Remove margin captions from html
Removed captions from figures and references in the margin and display
in the normal text-flow instead.
2023-12-09 19:05:10 +01:00
5d17d5091f
feat(script): Add introductory hook to income inequality
Added small hook which can be built upon later, introduces concept of primacy of
vertical income inequality but how it can exacerbate issues.
2023-12-09 19:04:26 +01:00
2cf2a03d87
fix(script): Remove visualization per literature type
For the time being removed the distinction between gray and white literature
as our sample did not lend itself to the dissection. May reintroduce later.
2023-12-09 18:58:27 +01:00
56e18b1285
fix(script): Calculate country groups for sample 2023-12-09 18:56:42 +01:00
3b6ed7a79b
feat(code): Add quick data querying notebook
Added a notebook which has the sole point of quickly allowing me
to grab and look at the data of the processed sample I am creating.

I.e. quickly list and uniq all interventions/outcomes/inequalities,
doing a tiny calculation or similar.
2023-12-09 18:50:43 +01:00
e2c629ff33
fix(data): Improve yml template whitespace preparation 2023-12-09 18:49:00 +01:00
b83f39ffc1
feat(data): Extract Wong2019 2023-12-09 18:48:59 +01:00
8bef9033f8
feat(data): Extract Alinaghi2020 2023-12-09 18:48:39 +01:00
9c8b42d3bc
feat(data): Extract Field2019 2023-12-09 17:00:05 +01:00
efdb42f36f
feat(data): Extract Carstens2018 2023-12-09 17:00:05 +01:00
a51e11b7f6
chore(data): Add irrelevant study 2023-12-09 16:09:08 +01:00
cc68e83730
fix(script): Improve spelling and wording 2023-12-09 13:04:01 +01:00
99672df48f
feat(data): Extract Whitworth2021 2023-12-09 13:03:30 +01:00
e1bb1b5fc3
feat(data): Extract Al-Mamun2014 2023-12-09 13:03:29 +01:00
b42838f173
chore(data): Unify intervention categories 2023-12-09 13:03:12 +01:00
09e2ae6317
feat(data): Extract Delesalle2021 2023-12-09 13:03:11 +01:00
12964bade3
chore(data): Re-integrate previous reviews into bibtex 2023-12-08 15:54:16 +01:00
6f1ce1f8b5
chore(script): Add tentative income inequality synthesis organization 2023-12-08 12:38:18 +01:00
a25e2c4943
chore(code): Add experimental molten notebook 2023-12-08 12:37:43 +01:00
0e11920166
fix(data): Fix intervention type tags Blumenberg2014 2023-12-07 22:43:08 +01:00
ed3d09b3f7
feat(script): Use extracted data for manuscript
For the first time we use the actual final extracted data from relevant studies
to do analysis on instead of just the intermediate Zotero-provided metadata.

We still inject the intermediate metadata where it may be useful (things like
citation counts and keywords) but otherwise switch to the new data.
2023-12-07 22:34:18 +01:00
e4e7d9e3e4
feat(data): Add publication type to extracted data 2023-12-07 21:40:48 +01:00
a854794a43
chore(repo): Move scripts to src directory 2023-12-07 21:16:12 +01:00
76ff71765c
chore(script): Lowercase all df columns
In preparation for the processed sample renamed all columns to
their lowercase versions.
2023-12-07 20:40:54 +01:00
d88c733b6d
feat(data): Prepare loading WB country group data 2023-12-07 20:11:27 +01:00
8f0f57edcc
feat(script): Begin adding spatial inequality section 2023-12-07 16:56:18 +01:00
1589b8c6fb
feat(data): Extract Kuriyama2021 2023-12-07 16:53:51 +01:00
c96d34e972
feat(data): Extract SilveiraNeto2011 2023-12-07 16:04:26 +01:00
b7bb04b7dc
feat(data): Extract Gilbert2001 2023-12-07 15:30:33 +01:00
7248a07ec1
feat(data): Extract Blumenberg2014 2023-12-07 14:38:16 +01:00
343de33552
chore(data): Switch to -1/0/1 coding for impact direction
So we can also express simply no relation between the variables in
any direction.
2023-12-07 14:36:39 +01:00
0c70a4a2b1
feat(data): Extract Adam2018 2023-12-07 13:56:23 +01:00
446db080f6
chore(code): Refactor yml loading code
Fix for new paths and restructure to have the from_yml and to_tsv
functions in the same data loading file.
Improved path behavior to resolve any paths to absolutes before
loading.
2023-12-07 13:04:29 +01:00
d3a6b1296b
chore(repo): Move extracted yml data to processed dir
Since it has been processed it should reside in the processed dir
2023-12-07 12:44:00 +01:00
4cc1fb8b34
chore(data): Update bib file associations 2023-12-07 12:40:44 +01:00
11ce772809
feat(data): Update query to actual WOS undertaken 2023-12-07 11:21:24 +01:00
90b23349b4
feat(notes): Ensure notes use embedded query 2023-12-07 11:21:10 +01:00
7329540465
feat(script): Move query to imported file
Moved search query to file which is imported and acts as
single source of truth for script, notes, etc.
2023-12-07 11:20:02 +01:00
1e4817196c
chore(script): Rename data paths 2023-12-07 11:20:01 +01:00
12704e64f5
feat(repo): Add edit task to poe 2023-12-07 11:06:48 +01:00
6130c79c53
feat(script): Add first gender annotations 2023-12-07 11:06:10 +01:00
9df67f6189
chore(data): Update bibkeys and files 2023-12-07 10:49:25 +01:00
ce2a231478
feat(data): Extract Stock2021 2023-12-07 10:49:08 +01:00
52f9d8635f
feat(repo): Add task runner for common operations
Set up poethepoet for quarto rendering and previewing.
Can be invoked through `poetry preview` or `poetry render`.
Will for now only preview the main scoping review file.
2023-12-07 09:30:16 +01:00
fae59c5a7d
chore(repo): Update quarto html rendering 2023-12-07 09:21:30 +01:00
ff4af556a5
feat(scripts): Add figure for intervention and inequality types 2023-12-07 09:05:04 +01:00