nvim: Remove debug printing of activated python venv

Removed notification on activating a python venv. It should just work, transparent to the user and we do not need a big ol' notification each time we enter a file.
nvim: Add markdown code evaluation mappings
2023-10-02 19:21:29 +02:00 · 2023-10-02 19:20:44 +02:00 · 2023-10-02 19:18:29 +02:00 · 2023-10-02 19:16:23 +02:00 · 2023-10-02 19:14:50 +02:00 · 2023-10-02 19:14:25 +02:00
35 changed files with 460 additions and 123 deletions
--- a/bootstrap/packages_stable.tsv
+++ b/bootstrap/packages_stable.tsv
@ -69,7 +69,6 @@ exa	ls replacement	R
 exercism-bin	Command line client for exercism.io	A	
 exfat-utils	Utilities for exFAT file system	R	
 f3	Simple tool that tests flash cards capacity and performance to see if they live up to claimed specifications	A	
-fasd	Command-line productivity booster, offers quick access to files and directories	R	
 fd	Simple, fast and user-friendly alternative to find	R	
 ffmpegthumbnailer	Lightweight video thumbnailer that can be used by file managers	R	
 firefox	Standalone web browser from mozilla.org	R	
@ -275,6 +274,7 @@ screen	Full-screen window manager that multiplexes a physical terminal	R
 sfz	A simple static file server	A	
 shellcheck-bin	Shell script analysis tool (binary release, static)	A	
 shfmt	Format shell programs	R	
+sioyek	PDF viewer for research papers and technical books.	A	
 slurp	Select a region in a Wayland compositor	R	
 smartmontools	Control and monitor S.M.A.R.T. enabled ATA and SCSI Hard Drives	R	
 snap-pac	Pacman hooks that use snapper to create pre/post btrfs snapshots like openSUSE's YaST	R	
@ -357,6 +357,7 @@ zathura-djvu	DjVu support for Zathura	R
 zathura-pdf-mupdf	PDF support for Zathura (MuPDF backend) (Supports PDF, ePub, and OpenXPS)	R	
 zk	A command-line tool helping you to maintain a Zettelkasten or personal wiki	R	
 zotero-bin	Zotero Standalone. Is a free, easy-to-use tool to help you collect, organize, cite, and share your research sources.	A	
+zoxide	A smarter cd command for your terminal	R	
 zq	Tooling for super-structured data	A	
 zsh-autosuggestions	Fish-like autosuggestions for zsh	R	
 zsh-fast-syntax-highlighting	Optimized and extended zsh-syntax-highlighting	A	
--- a/bootstrap/packages_testing.tsv
+++ b/bootstrap/packages_testing.tsv
@ -1,7 +1,17 @@
 Name	Description	Source	Target
 adbfs-rootless-git	fuse filesystem over adb tool for android devices, no device root required	A	
-eslint	An AST-based pattern checker for JavaScript	R	
+arch-install-scripts	Scripts to aid in installing Arch Linux	R	
+blueberry	Bluetooth configuration tool	R	
+dotter-rs-bin	A dotfile manager and templater written in Rust	A	
+eza	A modern replacement for ls (community fork of exa)	R	
+feishin-appimage	A modern self-hosted music player.	A	
+git-delta	Syntax-highlighting pager for git and diff output	R	
+khal	CLI calendar application built around CalDAV	R	
 m4b-tool-bin	A command line utility to merge, split and chapterize audiobook files such as mp3, ogg, flac, m4a or m4b	A	
-qutebrowser-qt6-git	A keyboard-driven, vim-like browser based on PyQt5 (Qt 6 branch)	A	
+nodejs-markmap-cli	Create markmaps (mindmaps from markdown) from CLI	A	
+pv	A terminal-based tool for monitoring the progress of data through a pipeline	R	
+qpwgraph	PipeWire Graph Qt GUI Interface	R	
 texlive-latexextra	TeX Live - LaTeX additional packages	R	
-time	Utility for monitoring a program's use of system resources	R	
+toilet	Free replacement for the FIGlet utility	R	
+vifm	A file manager with curses interface, which provides Vi[m]-like environment	R	
+woeusb-ng	Simple tool that enable you to create your own usb stick with Windows installer.	A	
--- a/desktop/.config/flavours/config.toml
+++ b/desktop/.config/flavours/config.toml
@ -82,3 +82,11 @@ rewrite = false
 start = "# Start flavours"
 end = "# End flavours"
 hook = "killall mako"
+
+[[items]]
+# SIOYEK does not support includes afaik
+template = "sioyek"
+file = "~/.config/sioyek/prefs_user.config"
+rewrite = false
+start = "# START FLAVOURS"
+end = "# END FLAVOURS"
--- a/desktop/.config/flavours/templates/sioyek/default.mustache
+++ b/desktop/.config/flavours/templates/sioyek/default.mustache
@ -0,0 +1,20 @@
+# base16-sioyek (https://github.com/loiccoyle/base16-sioyek)
+# by Loic Coyle
+# {{scheme-name}} scheme by{{scheme-author}}
+
+custom_background_color #{{base00-hex}}
+custom_text_color #{{base06-hex}}
+
+page_separator_color #{{base00-hex}}
+search_highlight_color #{{base0A-hex}}
+status_bar_color #{{base00-hex}}
+status_bar_text_color #{{base06-hex}}
+ui_text_color #{{base06-hex}}
+ui_selected_text_color #{{base06-hex}}
+ui_background_color #{{base01-hex}}
+ui_selected_background_color #{{base03-hex}}
+background_color #{{base00-hex}}
+visual_mark_color {{base03-dec-r}} {{base03-dec-g}} {{base03-dec-b}} 0.2
+text_highlight_color #{{base03-hex}}
+link_highlight_color #{{base0D-hex}}
+synctex_highlight_color #{{base08-hex}}
--- a/desktop/.config/river/init
+++ b/desktop/.config/river/init
@ -124,6 +124,9 @@ riverctl map normal $mod F toggle-fullscreen
 # Make all connected outputs show the desktop and no windows at all
 riverctl map normal $mod+Shift M spawn 'for i in $(wlopm | wc -l); do riverctl set-focused-tags $((1 << 10)); riverctl focus-output next; done; riverctl set-focused-tags $((1 << 10)); riverctl focus-output next'

+riverctl map normal $mod+Shift F10 spawn 'riverctl send-layout-cmd rivercarro "gaps 0"'
+riverctl map normal $mod F10 spawn 'riverctl send-layout-cmd rivercarro "gaps 6"'
+
 # toggle float
 riverctl map normal $mod+Shift v toggle-float
 # Mod + Left Mouse Button to move views
@ -191,8 +194,8 @@ for mode in normal locked; do
    # Eject the optical drive
    riverctl map $mode None XF86Eject spawn 'eject -T'

-    riverctl map $mode None XF86AudioRaiseVolume spawn 'pactl set-sink-volume @DEFAULT_SINK@ +5%'
-    riverctl map $mode None XF86AudioLowerVolume spawn 'pactl set-sink-volume @DEFAULT_SINK@ -5%'
+    riverctl map -repeat $mode None XF86AudioRaiseVolume spawn 'pactl set-sink-volume @DEFAULT_SINK@ +5%'
+    riverctl map -repeat $mode None XF86AudioLowerVolume spawn 'pactl set-sink-volume @DEFAULT_SINK@ -5%'
    riverctl map $mode None XF86AudioMute spawn 'pactl set-sink-mute @DEFAULT_SINK@ toggle'

    # Control MPRIS aware media players with playerctl (https://github.com/altdesktop/playerctl)
@ -202,8 +205,8 @@ for mode in normal locked; do
    riverctl map $mode None XF86AudioNext spawn 'playerctl next'

    # You can control screen backlight brighness with light (https://github.com/haikarainen/light); but we prefer brightnessctl
-    riverctl map $mode None XF86MonBrightnessUp spawn 'brightnessctl set 10%+'
-    riverctl map $mode None XF86MonBrightnessDown spawn 'brightnessctl set 10%-'
+    riverctl map -repeat $mode None XF86MonBrightnessUp spawn 'brightnessctl set 10%+'
+    riverctl map -repeat $mode None XF86MonBrightnessDown spawn 'brightnessctl set 10%-'
 done

 # The scratchpad will live on an unused tag. Which tags are used depends on your
@ -239,6 +242,9 @@ done

 setxkbmap -option "compose:menu"

+# start dynamic display configuration
+[ "$(pidof kanshi)" -eq 0 ] || riverctl spawn kanshi
+
 # set a nice wallpaper
 if exist swww; then
    riverctl spawn "swww init"
@ -255,10 +261,6 @@ fi
 killall waybar
 riverctl spawn waybar

-# start dynamic display configuration
-killall kanshi
-riverctl spawn kanshi
-
 # start redshift-like sundown warming using current location or standard values
 killall wlsunset
 loc=$(curl ipinfo.io | grep -e '"loc": ' | sed -e 's/^.*"loc": "\(.*\)",$/\1/')
--- a/desktop/.config/user-dirs.dirs
+++ b/desktop/.config/user-dirs.dirs
@ -12,4 +12,4 @@ XDG_MUSIC_DIR="$HOME/media/audio/music"
 XDG_PICTURES_DIR="$HOME/pictures"
 XDG_PUBLICSHARE_DIR="$HOME/"
 XDG_TEMPLATES_DIR="$HOME/"
-XDG_VIDEOS_DIR="$HOME/"
+XDG_VIDEOS_DIR="$HOME/media/videos"
--- a/git/.config/sh/alias.d/git.sh
+++ b/git/.config/sh/alias.d/git.sh
@ -40,7 +40,9 @@ alias gi='git ignore'
 alias gll='git last'
 # show quick log overview
 alias glg='git log --oneline --decorate --graph'
+alias glgd="git log --graph --pretty=format:'%C(auto)%h%Creset %C(cyan)%ar%Creset%C(auto)%d%Creset %s'"
 alias glga='git log --oneline --decorate --graph --remotes --all'
+alias glgad="git log --graph --remotes --all --pretty=format:'%C(auto)%h%Creset %C(cyan)%ar%Creset%C(auto)%d%Creset %s'"
 # show detailed log overview
 alias glog='git log --stat'
 # show detailed log overview with contents
--- a/multimedia/.config/imv/config
+++ b/multimedia/.config/imv/config
@ -0,0 +1,20 @@
+[options]
+background = #080808
+overlay = false
+overlay_position_bottom = true
+overlay_font = monospace:12
+overlay_text_color = #c6c6c6
+overlay_background_color = #1c1c1c
+overlay_background_alpha = ff
+
+[binds]
+n = next
+p = prev
+o = overlay
+<Shift+K> = zoom 5
+<Shift+J> = zoom -5
+<Shift+R> = rotate by 90
+z = flip horizontal
+<Shift+Z> = flip vertical
+y = exec wl-copy "$imv_current_file"
+Y = exec wl-copy < "$imv_current_file"
--- a/nvim/.config/nvim/after/ftplugin/markdown.lua
+++ b/nvim/.config/nvim/after/ftplugin/markdown.lua
@ -0,0 +1,25 @@
+local map = vim.keymap.set
+require('which-key').register({ ["<localleader>c" ] = { name = "+md-code"}})
+require('which-key').register({ ["<localleader>e" ] = { name = "+criticmarkup"}})
+
+-- edit code cells with full lsp access
+map("n", "<localleader>ce", "<cmd>FeMaco<cr>", { silent = true, desc = "edit code block" })
+-- execute code cells
+map("n", "<localleader>cc", "<cmd>MdEval<cr>", { silent = true, desc = "evaluate code block" })
+map("n", "<localleader>cx", "<cmd>MdEvalClean<cr>", { silent = true, desc = "clear code results" })
+
+-- jump to beginning of previous/ next cell code
+map("n", "]c", "/^```<cr>}:nohl<cr>", { desc = "next code cell" })
+map("n", "[c", "?^```<cr>n}:nohl<cr>", { desc = "previous code cell" })
+-- insert cell header above/below
+map("n", "<localleader>co", "o```python<cr><cr>```<esc>k", { desc = "Insert quarto cell below" })
+map("n", "<localleader>cO", "O```python<cr><cr>```<esc>k", { desc = "Insert quarto cell above" })
+
+-- show nice md preview in browser (auto-syncs scrolling)
+map("n", "<localleader>cp", "<Plug>MarkdownPreviewToggle", { desc = "show md preview" })
+
+-- create mindmaps directly from markdown! requires external executable
+if (vim.fn.executable("markmap")) then
+    map("n", "<localleader>cm", "<cmd>MarkmapOpen<cr>", { desc = "open md mindmap" })
+    map("n", "<localleader>cM", "<cmd>MarkmapWatch<cr>", { desc = "watch for md mindmap" })
+end
--- a/nvim/.config/nvim/after/ftplugin/quarto.lua
+++ b/nvim/.config/nvim/after/ftplugin/quarto.lua
@ -4,7 +4,9 @@ local startsession = function(file, args)
 	local path = require("util").get_python_venv()
 	vim.g["python3_host_prog"] = path

-	if vim.fn.executable('jupyter-console') ~= 1 then return end
+	if vim.fn.executable("jupyter-console") ~= 1 then
+		return
+	end

 	if args then
 		file = args[0]
--- a/nvim/.config/nvim/lazy-lock.json
+++ b/nvim/.config/nvim/lazy-lock.json
@ -1,13 +1,14 @@
 {
  "Arduino.nvim": { "branch": "main", "commit": "1e986040861e77dd7107abfecc473c60ccd97d3f" },
  "BetterLua.vim": { "branch": "master", "commit": "d2d6c115575d09258a794a6f20ac60233eee59d5" },
+  "FixCursorHold.nvim": { "branch": "master", "commit": "1900f89dc17c603eec29960f57c00bd9ae696495" },
  "LuaSnip": { "branch": "master", "commit": "0b4950a237ce441a6a3a947d501622453f6860ea" },
  "Navigator.nvim": { "branch": "master", "commit": "91d86506ac2a039504d5205d32a1d4bc7aa57072" },
-  "aerial.nvim": { "branch": "master", "commit": "fb1f08c9f90e8b0c04b2f2c5d95d06288a14c5b2" },
+  "aerial.nvim": { "branch": "master", "commit": "ae33427e1aa54bfdd164313716cdc10e7d7b927a" },
  "bats.vim": { "branch": "master", "commit": "6a5d2ef22b0ede503d867770afd02ebb1f97b709" },
  "cmp-beancount": { "branch": "main", "commit": "da154ea94d598e6649d6ad01efa0a8611eff460d" },
  "cmp-buffer": { "branch": "main", "commit": "3022dbc9166796b644a841a02de8dd1cc1d311fa" },
-  "cmp-calc": { "branch": "main", "commit": "50792f34a628ea6eb31d2c90e8df174671e4e7a0" },
+  "cmp-calc": { "branch": "main", "commit": "ce91d14d2e7a8b3f6ad86d85e34d41c1ae6268d9" },
  "cmp-cmdline": { "branch": "main", "commit": "8ee981b4a91f536f52add291594e89fb6645e451" },
  "cmp-digraphs": { "branch": "master", "commit": "5efc1f0078d7c5f3ea1c8e3aad04da3fd6e081a9" },
  "cmp-latex-symbols": { "branch": "main", "commit": "165fb66afdbd016eaa1570e41672c4c557b57124" },
@ -16,57 +17,64 @@
  "cmp-nvim-lua": { "branch": "main", "commit": "f12408bdb54c39c23e67cab726264c10db33ada8" },
  "cmp-pandoc-references": { "branch": "master", "commit": "2c808dff631a783ddd2c554c4c6033907589baf6" },
  "cmp-path": { "branch": "main", "commit": "91ff86cd9c29299a64f968ebb45846c485725f23" },
-  "cmp-rg": { "branch": "master", "commit": "1cad8eb315643d0df13c37401c03d7986f891011" },
-  "cmp-spell": { "branch": "master", "commit": "60584cb75e5e8bba5a0c9e4c3ab0791e0698bffa" },
-  "cmp-tmux": { "branch": "main", "commit": "984772716f66d8ee88535a6bf3f94c4b4e1301f5" },
+  "cmp-rg": { "branch": "master", "commit": "677a7874ee8f1afc648c2e7d63a97bc21a7663c5" },
+  "cmp-spell": { "branch": "master", "commit": "32a0867efa59b43edbb2db67b0871cfad90c9b66" },
+  "cmp-tmux": { "branch": "main", "commit": "97ec06b8030b8bf6d1fd83d49bdd16c98e04c845" },
  "cmp-treesitter": { "branch": "master", "commit": "389eadd48c27aa6dc0e6b992644704f026802a2e" },
  "cmp_luasnip": { "branch": "master", "commit": "18095520391186d634a0045dacaa346291096566" },
  "completion-vcard": { "branch": "master", "commit": "2220fd517a985ececed1adcf0e5be8f2815564c7" },
  "dial.nvim": { "branch": "master", "commit": "54b503f906bc9e5ab85288414840a1b86d40769f" },
-  "dressing.nvim": { "branch": "master", "commit": "c0b67f3e2950adc07b555d3e73e38275b4a585ce" },
+  "dressing.nvim": { "branch": "master", "commit": "59fe7ef1aeeed499b983614fcfff89206bf0d5ce" },
  "fidget.nvim": { "branch": "main", "commit": "0ba1e16d07627532b6cae915cc992ecac249fb97" },
-  "friendly-snippets": { "branch": "main", "commit": "377d45475b49e37460a902d6d569d2093d4037d0" },
+  "friendly-snippets": { "branch": "main", "commit": "ebf6d6e83494cdd88a54a429340256f4dbb6a052" },
  "fwatch.nvim": { "branch": "main", "commit": "a691f7349dc66285cd75a1a698dd28bca45f2bf8" },
-  "git-conflict.nvim": { "branch": "main", "commit": "8d962d83cae924a314965f738ed1e05a4000d682" },
+  "git-conflict.nvim": { "branch": "main", "commit": "4e0191c9a0ae05d7fbdcdc7f15cd358f56d23bfb" },
  "gitsigns.nvim": { "branch": "main", "commit": "bb808fc7376ed7bac0fbe8f47b83d4bf01738167" },
  "headlines.nvim": { "branch": "master", "commit": "74a083a3c32a08be24f7dfcc6f448ecf47857f46" },
  "jupyter-kernel.nvim": { "branch": "main", "commit": "5b409598033884a3d819e2a3bcd1fe340bc8d783" },
  "lazy.nvim": { "branch": "main", "commit": "3ad55ae678876516156cca2f361c51f7952a924b" },
  "lightspeed.nvim": { "branch": "main", "commit": "299eefa6a9e2d881f1194587c573dad619fdb96f" },
-  "lsp-setup.nvim": { "branch": "main", "commit": "64542fb0da06414cdfaa0c5236b743679bb7ba7f" },
+  "lsp-setup.nvim": { "branch": "main", "commit": "7276e54faf4af909b6ea171975fd4179ebe65cec" },
  "lualine.nvim": { "branch": "master", "commit": "45e27ca739c7be6c49e5496d14fcf45a303c3a63" },
  "magma-nvim-goose": { "branch": "main", "commit": "9a626aab63361d027541d023707f82e28d7f872c" },
  "markdown-preview.nvim": { "branch": "master", "commit": "9becceee5740b7db6914da87358a183ad11b2049" },
-  "mason-lspconfig.nvim": { "branch": "main", "commit": "e86a4c84ff35240639643ffed56ee1c4d55f538e" },
+  "markmap.nvim": { "branch": "main", "commit": "3befc2a54c2448a16c30c1c7762aab263f22946a" },
+  "mason-lspconfig.nvim": { "branch": "main", "commit": "f014db32437aa61c86fc0ef1067cd2bc6a37205c" },
  "mason-null-ls.nvim": { "branch": "main", "commit": "ae0c5fa57468ac65617f1bf821ba0c3a1e251f0c" },
-  "mason.nvim": { "branch": "main", "commit": "74eac861b013786bf231b204b4ba9a7d380f4bd9" },
-  "mini.nvim": { "branch": "main", "commit": "296ebbbd3e5ba5e43f5125efe18ad76fe3b632cc" },
+  "mason.nvim": { "branch": "main", "commit": "d66c60e17dd6fd8165194b1d14d21f7eb2c1697a" },
+  "mdeval.nvim": { "branch": "master", "commit": "2654caf8ecaad702b50199d18e39cff23d81e0ba" },
+  "mini.nvim": { "branch": "main", "commit": "707dca4f4152c2d9c9b4c5e02635f78dfd33db50" },
+  "neotest": { "branch": "master", "commit": "6fd61fe665381939a6d70eb08ef1959a10af369e" },
+  "neotest-python": { "branch": "master", "commit": "81d2265efac717bb567bc15cc652ae10801286b3" },
  "null-ls.nvim": { "branch": "main", "commit": "0010ea927ab7c09ef0ce9bf28c2b573fc302f5a7" },
-  "nvim-base16": { "branch": "master", "commit": "6247ca9aa9f34644dfa290a6df3f6feefb73eb97" },
-  "nvim-cmp": { "branch": "main", "commit": "51f1e11a89ec701221877532ee1a23557d291dd5" },
+  "nvim-FeMaco.lua": { "branch": "main", "commit": "c4e9c71c9ca595772a360435bdf91bee3f9d32b1" },
+  "nvim-base16": { "branch": "master", "commit": "96e308958625a84940d5e443475465abf99c7bd9" },
+  "nvim-cmp": { "branch": "main", "commit": "5dce1b778b85c717f6614e3f4da45e9f19f54435" },
  "nvim-colorizer.lua": { "branch": "master", "commit": "dde3084106a70b9a79d48f426f6d6fec6fd203f7" },
-  "nvim-lspconfig": { "branch": "master", "commit": "0d29cad8de3b2c654315203fc1fe12fde722a18a" },
+  "nvim-coverage": { "branch": "main", "commit": "4634dfb00961a86948518c7e6f85737c24364308" },
+  "nvim-lspconfig": { "branch": "master", "commit": "bfdf2e91e7297a54bcc09d3e092a12bff69a1cf4" },
  "nvim-notify": { "branch": "master", "commit": "ea9c8ce7a37f2238f934e087c255758659948e0f" },
  "nvim-surround": { "branch": "main", "commit": "0d6882635817a2677749a330127d12ac30a4f3c8" },
-  "nvim-toggleterm.lua": { "branch": "main", "commit": "b90a1381e9b5b8596f49070ee86c71db267ac868" },
-  "nvim-tree.lua": { "branch": "master", "commit": "18c7a3119839adc4599d838726deae662859c8b2" },
+  "nvim-toggleterm.lua": { "branch": "main", "commit": "faee9d60428afc7857e0927fdc18daa6c409fa64" },
+  "nvim-tree.lua": { "branch": "master", "commit": "ce3495bd4c9a7d8e8a64fac9cc3c252dac19a994" },
  "nvim-treesitter": { "branch": "master", "commit": "63260da18bf273c76b8e2ea0db84eb901cab49ce" },
-  "nvim-treesitter-context": { "branch": "master", "commit": "d8fd71428e02190d8f75ff915b6cca9e3063992c" },
+  "nvim-treesitter-context": { "branch": "master", "commit": "6795de086ef713383e06b53faa534a597436159a" },
  "nvim-treesitter-textsubjects": { "branch": "master", "commit": "df75fcec548014f158cda6498ac38c4622c221e1" },
  "nvim-ts-autotag": { "branch": "main", "commit": "6be1192965df35f94b8ea6d323354f7dc7a557e4" },
-  "nvim-ts-context-commentstring": { "branch": "main", "commit": "e9062e2dfb9854e6a927370f2d720de354c88524" },
+  "nvim-ts-context-commentstring": { "branch": "main", "commit": "95e9ba9de4289d221666b66fd930d157c7ca08c6" },
  "nvim-ts-rainbow2": { "branch": "master", "commit": "b3120cd5ae9ca524af9cb602f41e12e301fa985f" },
-  "nvim-web-devicons": { "branch": "master", "commit": "ab899311f8ae00a47eae8e0879506cead8eb1561" },
-  "otter.nvim": { "branch": "main", "commit": "dda3359750a2f9c0d6ae073d967296f57fe99d8b" },
-  "playground": { "branch": "master", "commit": "2b81a018a49f8e476341dfcb228b7b808baba68b" },
+  "nvim-web-devicons": { "branch": "master", "commit": "45d0237c427baba8cd05e0ab26d30e2ee58c2c82" },
+  "otter.nvim": { "branch": "main", "commit": "2752dd199d73342f13a1bd599a99822505e2803f" },
+  "playground": { "branch": "master", "commit": "ba48c6a62a280eefb7c85725b0915e021a1a0749" },
  "plenary.nvim": { "branch": "master", "commit": "253d34830709d690f013daf2853a9d21ad7accab" },
  "popup.nvim": { "branch": "master", "commit": "b7404d35d5d3548a82149238289fa71f7f6de4ac" },
-  "quarto-nvim": { "branch": "main", "commit": "35f86035e7b3846dbf168267ffe0021c3d312259" },
-  "smartcolumn.nvim": { "branch": "main", "commit": "c2441d4490b7485844ac9ff2d44d882ff7536979" },
-  "telescope-fzf-native.nvim": { "branch": "main", "commit": "9bc8237565ded606e6c366a71c64c0af25cd7a50" },
-  "telescope.nvim": { "branch": "master", "commit": "776b509f80dd49d8205b9b0d94485568236d1192" },
+  "quarto-nvim": { "branch": "main", "commit": "b349b7e54f5f5543b6104bfbad0e7d09d4f7c564" },
+  "smartcolumn.nvim": { "branch": "main", "commit": "d01b99355c7fab13233f48d0f28dc097e68a03f7" },
+  "stickybuf.nvim": { "branch": "master", "commit": "e3db41f2c1bb2df3ee6ff964ee74fe991f6f9566" },
+  "telescope-fzf-native.nvim": { "branch": "main", "commit": "6c921ca12321edaa773e324ef64ea301a1d0da62" },
+  "telescope.nvim": { "branch": "master", "commit": "54930e1abfc94409e1bb9266e752ef8379008592" },
  "twilight.nvim": { "branch": "main", "commit": "8bb7fa7b918baab1ca81b977102ddb54afa63512" },
-  "undotree": { "branch": "main", "commit": "2685ce282702ab0b79c65916f352db2265b245dd" },
+  "undotree": { "branch": "main", "commit": "41f56b30cc774ad26c4945c7e10673453893e7ad" },
  "vifm.vim": { "branch": "master", "commit": "a8130c37d144b51d84bee19f0532abcd3583383f" },
  "vim-criticmarkup": { "branch": "master", "commit": "d15dc134eb177a170c79f6377f81eb02a9d20b02" },
  "vim-easy-align": { "branch": "master", "commit": "0db4ea6132110631ec678a99a82aa49a0686ae65" },
--- a/nvim/.config/nvim/lua/core/mappings.lua
+++ b/nvim/.config/nvim/lua/core/mappings.lua
@ -180,8 +180,6 @@ map("n", "<localleader>q", "gqap", { silent = true, desc = "Format current parag
 map("x", "<localleader>q", "gq", { silent = true, desc = "Format {motion}" })
 map("n", "<localleader>Q", "vapJgqap", { silent = true, desc = "Unformat then format paragraph" })

-map("n", "<localleader>mp", "<Plug>MarkdownPreviewToggle", { desc = "Toggle md preview" })
-
 -- FORMAT code with
 -- PLUGIN: formatter.nvim
 map("n", "<localleader>f", ":FormatLock<cr>")
@ -205,6 +203,7 @@ map("n", "<leader>ss", ":lua MiniStarter.open()<cr>", { desc = "show startpage"

 -- PLUGIN: symbols-outline.nvim
 map("n", "<leader>so", "<cmd>AerialToggle<cr>", { silent = true, desc = "toggle symbol outline" })
+map("n", "<leader>sn", "<cmd>AerialNavToggle<cr>", { silent = true, desc = "toggle symbol navigator" })

 -- PLUGIN: nvim-tree
 map("n", "<leader>se", "<cmd>NvimTreeToggle<cr>", { silent = true, desc = "toggle filetree" })
@ -255,13 +254,11 @@ map("v", "<localleader>nf", ":ZkMatch<cr>", { desc = "find note from selection"
 -- PLUGIN: toggleterm.nvim
 -- create a lazygit or python window, set up in toggleterm settings
 -- TODO create ability to go into python environment when in poetry venv and/or euporie/jupyter notebook
-if is_available("nvim-toggleterm.lua") then
-	map("n", "<leader>G", ":Lazygit<cr>")
-	map("n", "<leader>tg", ":Lazygit<cr>")
-	map("n", "<leader>tG", ":Lazygit!<cr>")
-	map("n", "<leader>tp", ":Pythonterm<cr>")
-	map("n", "<leader>tP", ":Pythonterm!<cr>")
-end
+prefix({ ["<localleader>t"] = { name = "+term" } })
+map("n", "<leader>tg", ":Lazygit<cr>")
+map("n", "<leader>tG", ":Lazygit!<cr>")
+map("n", "<leader>tp", ":Pythonterm<cr>")
+map("n", "<leader>tP", ":Pythonterm!<cr>")

 prefix({ ["<localleader>s"] = { name = "+set" } })
 -- PLUGIN: wrapping.nvim
@ -271,16 +268,6 @@ map(
 	[[:lua require('wrapping').toggle_wrap_mode()<cr> ]],
 	{ silent = true, desc = "toggle wrap mode" }
 )
-- PLUGIN: easyread.nvim
-map("n", "<localleader>ss", ":EasyreadToggle<cr>", { silent = true, desc = "toggle speedreading" })
-- PLUGIN: nabla.nvim
-map("n", "<localleader>sv", '<cmd>lua require("nabla").popup()<cr>', { silent = true, desc = "latex formula popup" })
-map(
-	"n",
-	"<localleader>sV",
-	'<cmd>lua require("nabla").toggle_virt({autogen = true, silent = true})<cr>',
-	{ silent = true, desc = "toggle formula notation" }
-)
 -- PLUGIN: nvim-colorizer
 map("n", "<localleader>sc", "<cmd>ColorizerToggle<cr>", { silent = true, desc = "toggle colorizer" })
 map(
@ -291,10 +278,3 @@ map(
 )

 map("n", "<leader>sa", "<cmd>FormatOnSave<cr>", { silent = true, desc = "toggle format on save" })
-
-- PLUGIN: undotree
-if is_available("undotree") then
-	map("n", "<leader>su", function()
-		require("undotree").toggle()
-	end, { silent = true, desc = "toggle undotree" })
-end
--- a/nvim/.config/nvim/lua/plugins/config/lsp.lua
+++ b/nvim/.config/nvim/lua/plugins/config/lsp.lua
@ -48,13 +48,13 @@ local function on_attach(client, bufnr)
 	map("n", "]d", "<cmd>lua vim.diagnostic.goto_next()<cr>", { buffer = bufnr, desc = "Next diagnostic" })
 	map(
 		"n",
-		"[e",
+		"[D",
 		"<cmd>lua vim.diagnostic.goto_prev({severity = vim.diagnostic.severity.ERROR})<cr>",
 		{ buffer = bufnr, desc = "Previous error" }
 	)
 	map(
 		"n",
-		"]e",
+		"]D",
 		"<cmd>lua vim.diagnostic.goto_next({severity = vim.diagnostic.severity.ERROR})<cr>",
 		{ buffer = bufnr, desc = "Next error" }
 	)
@ -126,15 +126,29 @@ lsp.setup({

 local lspconfig = require("lspconfig")

+local python_path
 -- ensure python virtualenv is determined automatically on lsp start
 lspconfig.pyright.setup({
 	on_attach = function(client, bufnr)
-		on_attach(client, bufnr)
-		local python_path, _ = require("util").get_python_venv(client.config.root_dir)
-		vim.notify_once(string.format("[PYTHON VENV]\n%s", python_path))
+		if python_path == nil then
+			python_path, _ = require("util").get_python_venv(client.config.root_dir)
+		end
+		-- print(string.format("[PYTHON VENV]: %s", vim.inspect(python_path)))
 		client.config.settings.python.pythonPath = python_path
+		on_attach(client, bufnr)
 	end,
 })
+lspconfig.ruff_lsp.setup({
+	on_attach = function(client, bufnr)
+		if python_path == nil then
+			python_path, _ = require("util").get_python_venv(client.config.root_dir)
+		end
+		-- print(string.format("[PYTHON VENV]: %s", vim.inspect(python_path)))
+		client.config.settings.python.pythonPath = python_path
+		on_attach(client, bufnr)
+	end,
+})
+
 -- set up arduino with the help of arduino.nvim plugin
 if require("util").is_available("arduino") then
 	lspconfig.arduino_language_server.setup({
--- a/nvim/.config/nvim/lua/plugins/core.lua
+++ b/nvim/.config/nvim/lua/plugins/core.lua
@ -33,7 +33,6 @@ return {
 		config = function()
 			require("plugins.config.toggleterm")
 		end,
-		lazy = false,
 		cmd = { "ToggleTerm", "TermExec", "Lazygit", "Pythonterm" },
 	},
 	-- colorschemes
@ -43,4 +42,10 @@ return {
 		priority = 1000,
 		dependencies = { "rktjmp/fwatch.nvim" },
 	},
+    -- try to avoid putting files in util buffers, e.g. filetree, aerial, undotree, ..
+    {
+        'stevearc/stickybuf.nvim',
+        config = true,
+    }
+
 }
--- a/nvim/.config/nvim/lua/plugins/data_analysis.lua
+++ b/nvim/.config/nvim/lua/plugins/data_analysis.lua
@ -55,4 +55,27 @@ return {
 		ft = { "quarto", "python" },
 		lazy = false,
 	},
+
+    -- MARKDOWN ONLY
+	-- Evaluate markdown code blocks
+	{
+		"jubnzv/mdeval.nvim",
+		cmd = {
+			"MdEval",
+		},
+		ft = { "markdown" },
+		opts = {
+			require_confirmation = false,
+			eval_options = {},
+		},
+		lazy = false,
+	},
+	{
+	    "AckslD/nvim-FeMaco.lua",
+	    cmd = {
+	        "FeMaco"
+	    },
+	    ft = { "markdown" },
+	    config = true
+	}
 }
--- a/nvim/.config/nvim/lua/plugins/editing.lua
+++ b/nvim/.config/nvim/lua/plugins/editing.lua
@ -47,6 +47,6 @@ return {
 				},
 			})
 		end,
-		event = "VeryLazy",
+		event = "InsertEnter",
 	},
 }
--- a/nvim/.config/nvim/lua/plugins/ide.lua
+++ b/nvim/.config/nvim/lua/plugins/ide.lua
@ -8,11 +8,26 @@ return {
 			"nvim-treesitter/nvim-treesitter",
 			"nvim-tree/nvim-web-devicons",
 		},
-		event = "VeryLazy",
+		cmd = {
+			"AerialToggle",
+			"AerialOpen",
+			"AerialOpenAll",
+			"AerialClose",
+			"AerialCloseAll",
+			"AerialNext",
+			"AerialPrev",
+			"AerialGo",
+			"AerialInfo",
+			"AerialNavToggle",
+			"AerialNavOpen",
+			"AerialNavClose",
+		},
 		opts = {
 			backends = { "treesitter", "lsp", "markdown", "man" },
 		},
 	},
+
+	-- lsp setup
 	{
 		"junnplus/lsp-setup.nvim",
 		dependencies = {
@ -51,6 +66,7 @@ return {
 			require("plugins.config.lsp")
 		end,
 	},
+	-- completion setup
 	{
 		"hrsh7th/nvim-cmp",
 		branch = "main",
@ -82,7 +98,134 @@ return {
 		end,
 		event = { "InsertEnter", "CmdlineEnter", "VeryLazy" },
 	},
+
 	-- loading animations for some LSP
 	{ "j-hui/fidget.nvim", config = true, tag = "legacy", event = "VeryLazy" },
-	-- a pretend-lsp for formatters and linters
+
+	-- testing setup
+	{
+		"nvim-neotest/neotest",
+		dependencies = {
+			"nvim-lua/plenary.nvim",
+			"nvim-treesitter/nvim-treesitter",
+			"antoinemadec/FixCursorHold.nvim",
+
+			"nvim-neotest/neotest-python",
+		},
+		config = function()
+			require("neotest").setup({
+				adapters = {
+					require("neotest-python")({
+						-- with coverage requires coverage.py and pytest-cov installed
+						args = { "--cov" },
+					}),
+				},
+			})
+			local status, wk = pcall(require, "which-key")
+			if status then
+				wk.register({ ["<localleader>t"] = { name = "+test" } })
+			end
+		end,
+		ft = { "python" },
+		keys = {
+			{
+				"<leader>st",
+				[[<cmd>lua require('neotest').summary.toggle()<cr>]],
+				desc = "toggle test list",
+				silent = true,
+			},
+			{
+				"<leader>sT",
+				[[<cmd>lua require('neotest').output_panel.toggle()<cr>]],
+				desc = "toggle test output",
+				silent = true,
+			},
+			{
+				"<localleader>to",
+				[[<cmd>lua require('neotest').output.open()<cr>]],
+				desc = "toggle test output",
+				silent = true,
+			},
+			{
+				"<localleader>tt",
+				[[<cmd>lua require('neotest').run.run()<cr>]],
+				desc = "run nearest test",
+				silent = true,
+			},
+			{
+				"<localleader>td",
+				[[<cmd>lua require('neotest').run.run({strategy = "dap"})<cr>]],
+				desc = "debug nearest test",
+				silent = true,
+			}, -- REQUIRES DAP
+			{
+				"<localleader>tT",
+				[[<cmd>lua require('neotest').run.run(vim.fn.expand("%"))<cr>]],
+				desc = "test current file",
+				silent = true,
+			},
+			{
+				"<localleader>tr",
+				[[<cmd>lua require('neotest').run.run_last()<cr>]],
+				desc = "re-run last test",
+				silent = true,
+			},
+			{
+				"<localleader>tw",
+				[[<cmd>lua require('neotest').watch.toggle()<cr>]],
+				desc = "watch current test",
+				silent = true,
+			},
+			{
+				"<localleader>tW",
+				[[<cmd>lua require('neotest').watch.toggle(vim.fn.expand("%"))<cr>]],
+				desc = "watch current file",
+				silent = true,
+			},
+		},
+	},
+	-- TODO needs to pick up poetry env for python,
+	-- currently just hard-codes running through poetry
+	{
+		"andythigpen/nvim-coverage",
+		dependencies = {
+			"nvim-lua/plenary.nvim",
+		},
+		config = function()
+			require("coverage").setup({
+				lang = { python = { coverage_command = "poetry run coverage json -q -o -" } },
+			})
+		end,
+		ft = { "python" },
+		cmd = {
+			"Coverage",
+			"CoverageLoad",
+			"CoverageLoadLcov",
+			"CoverageShow",
+			"CoverageHide",
+			"CoverageToggle",
+			"CoverageClear",
+			"CoverageSummary",
+		},
+		keys = {
+			{
+				"<localleader>tp",
+				[[<cmd>Coverage<cr>]],
+				desc = "show coverage report",
+				silent = true,
+			},
+			{
+				"<localleader>tP",
+				[[<cmd>CoverageToggle<cr>]],
+				desc = "toggle coverage gutter",
+				silent = true,
+			},
+			{
+				"<localleader>ts",
+				[[<cmd>CoverageSummary<cr>]],
+				desc = "show coverage summary",
+				silent = true,
+			},
+		},
+	},
 }
--- a/nvim/.config/nvim/lua/plugins/prose.lua
+++ b/nvim/.config/nvim/lua/plugins/prose.lua
@ -12,8 +12,10 @@ return {
 			require("wrapping").setup({
 				create_keymappings = false,
 				notify_on_switch = false,
+				softener = { markdown = true, text = true, asciidoc = true }
 			})
 		end,
+		lazy = false
 	},
 	-- displays prettier headlines mimicking the ones in emacs orgmode
 	{
--- a/nvim/.config/nvim/lua/plugins/ui.lua
+++ b/nvim/.config/nvim/lua/plugins/ui.lua
@ -55,6 +55,16 @@ return {
 		dependencies = {
 			"nvim-lua/plenary.nvim",
 		},
-		config = true,		event = "VeryLazy",
+		config = true,
+		keys = {
+			{
+				"<leader>su",
+				function()
+					require("undotree").toggle()
+				end,
+				desc = "toggle undotree",
+				silent = true,
+			},
+		},
 	},
 }
--- a/nvim/.config/nvim/lua/util/init.lua
+++ b/nvim/.config/nvim/lua/util/init.lua
@ -5,10 +5,18 @@ local T = {}
 ---@param plugin string The plugin to search for
 ---@return boolean available # Whether the plugin is available
 function T.is_available(plugin)
-	local lazy_config_avail, lazy_config = pcall(require, "lazy.core.config")
-	return lazy_config_avail and lazy_config.plugins[plugin] ~= nil
+	return T.get_plugin(plugin) and true or false
 end

+-- Get the plugin file handle if it exists, return nil otherwise
+function T.get_plugin(plugin)
+    local status, lib = pcall(require, plugin)
+    if(status) then return lib end
+    return nil
+end
+
+-- get the current python environment
+-- return its path
 function T.get_python_venv(workspace)
 	return require("util.pyenv").get_path(workspace)
 end
--- a/nvim/.config/nvim/spell/en.utf-8.add
+++ b/nvim/.config/nvim/spell/en.utf-8.add
@ -186,3 +186,7 @@ Gitea
 caramelization
 Maillard
 individualities
+vaccilation
+SSCM
+GSCM
+multicriteria
--- a/office/.local/share/task/hooks/on-modify.timewarrior
+++ b/office/.local/share/task/hooks/on-modify.timewarrior
@ -55,10 +55,10 @@ def extract_tags_from(json_obj):
    tags = [json_obj['description']]

    if 'project' in json_obj:
-        tags.append(json_obj['project'])
+        tags.append(f"#{json_obj['project']}")

    if 'tags' in json_obj:
-        tags.extend(json_obj['tags'])
+        tags.extend([f"+{tag}" for tag in json_obj['tags']])

    return tags

--- a/qutebrowser/.config/qutebrowser/config.py
+++ b/qutebrowser/.config/qutebrowser/config.py
@ -56,6 +56,7 @@ c.tabs.title.format = "{index} {audio}{perc}{current_title}"
 c.tabs.position = "right"
 c.tabs.width = "15%"
 c.tabs.show = "multiple"
+c.tabs.show_switching_delay = 2000
 c.statusbar.show = "always"

 c.colors.webpage.bg = "#555555"
--- a/qutebrowser/.config/qutebrowser/content.py
+++ b/qutebrowser/.config/qutebrowser/content.py
@ -1,3 +1,5 @@
+# disable html5 canvas fingerprinting (at the cost of a couple streaming pages)
+c.content.canvas_reading = False
 c.content.blocking.enabled = True
 c.content.blocking.method = "both"
 c.content.blocking.adblock.lists = [
--- a/scripts/.local/bin/vidl
+++ b/scripts/.local/bin/vidl
@ -132,8 +132,8 @@ download() { # 1=url

 setup() {
    TEMP_FOLDER="${TEMP_FOLDER:-${HOME}/downloads}"
-    DL_FOLDER="${DL_FOLDER:-${XDG_VIDEOS_DIR:-$HOME/videos}/inbox}"
-    ARCHIVE_FOLDER="${ARCHIVE_FOLDER:-${XDG_VIDEOS_DIR:-$HOME/videos}/archive}"
+    DL_FOLDER="${DL_FOLDER:-${XDG_VIDEOS_DIR:-$HOME/media/videos}/inbox}"
+    ARCHIVE_FOLDER="${ARCHIVE_FOLDER:-${XDG_VIDEOS_DIR:-$HOME/media/videos}/archive}"
    YT_DL_CMD="${YT_DL_CMD:-yt-dlp}"
    yt_default_opts=(-f "best[height\<=1080]" --retries 15 --embed-chapters --embed-subs --sub-lang "en,de,es,fr")
    declare -a YT_DL_OPTS=${YT_DL_OPTS:-( "${yt_default_opts[@]}" )}
--- a/sh/.config/sh/alias.d/enable-fasd-hook.sh
+++ b/sh/.config/sh/alias.d/enable-fasd-hook.sh
@ -1,31 +0,0 @@
-#!/bin/sh
-# more usage instructions at https://github.com/clvv/fasd
-# exist fasd && eval "$(fasd --init posix-hook posix_alias bash-hook zsh-hook zsh-ccomp zsh-ccomp-install zsh-wcomp zsh-wcomp-install)"
-exist fasd && eval "$(fasd --init auto)"
-
-# any
-alias a='fasd -a'
-# show / search / select
-alias s='fasd -si'
-# alias d='fasd -d'        # directory
-# alias f='fasd -f'        # file
-# alias sd='fasd -sid'     # interactive directory selection
-# alias sf='fasd -sif'     # interactive file selection
-# cd, same functionality as j in autojump
-alias z='fasd_cd -d'
-# cd with interactive selection
-alias zz='fasd_cd -d -i'
-
-# from: https://github.com/clvv/fasd/issues/10
-# since I can only load auto configuration and have default fasd_cd AND useless aliases
-# or manually load the modules and NOT have fasd_cd
-# it's easier to use this function
-fasd_cd() {
-    fasd_ret="$(fasd -d "$@")"
-    if [ -d "$fasd_ret" ]; then
-        cd "$fasd_ret" || exit
-    else
-        printf "%s\n" "$fasd_ret"
-    fi
-    unset fasd_ret
-}
--- a/sh/.config/sh/env
+++ b/sh/.config/sh/env
@ -35,7 +35,7 @@ export BROWSER="qutebrowser"
 export TERMINAL="wezterm"
 export PAGER="less"

-export FILEREADER="zathura"
+export FILEREADER="sioyek"
 export FILEMANAGER="vifm"

 ## gopath
--- a/terminal/.bashrc
+++ b/terminal/.bashrc
@ -24,5 +24,6 @@ if [ -d "$CONFDIR/bash/alias.d" ]; then
    unset _alias
 fi

+eval "$(zoxide init bash)"
 alias ls='ls --color=auto'
 PS1='[\u@\h \W]\$ '
--- a/terminal/.config/vifm/vifmrc
+++ b/terminal/.config/vifm/vifmrc
@ -358,7 +358,7 @@ set classify+=' ::*.doc,,*.docx::, ::*.xls,,*.xls[mx]::, ::*.pptx,,*.pp
 " Pdf
 filextype *.pdf
        \ { view as rich file }
-        \ zathura %c %i &, apvlv %c, xpdf %c,
+        \ sioyek %c %i, zathura %c %i &, apvlv %c, xpdf %c,
        \ { edit text content }
        \ pdftotext -nopgbrk %c - | nvim
 fileviewer *.pdf pdftotext -nopgbrk %c -
@ -366,14 +366,14 @@ fileviewer *.pdf pdftotext -nopgbrk %c -
 " PostScript
 filextype *.ps,*.eps,*.ps.gz
        \ {View in zathura}
-        \ zathura %f,
+        \ sioyek %f, zathura %f,
        \ {View in gv}
        \ gv %c %i &,

 " Djvu
 filextype *.djvu,*.epub
        \ {View in zathura}
-        \ zathura %f,
+        \ sioyek %f, zathura %f,
        \ {View in apvlv}
        \ apvlv %f,

--- a/terminal/.config/zsh/.zshrc
+++ b/terminal/.config/zsh/.zshrc
@ -99,6 +99,8 @@ ENABLE_CORRECTION="true"
 # allow moving through directories without prepending cd
 setopt autocd

+eval "$(zoxide init zsh)"
+
 # Speed up autocomplete, force prefix mapping
 zstyle ':completion:*' accept-exact '*(N)'
 zstyle ':completion:*' use-cache on
--- a/writing/.config/papis/config
+++ b/writing/.config/papis/config
@ -3,9 +3,9 @@ default-library = main
 formater = bbt
 local-config-file = .papis.config

-# opentool = zathura
+opentool = sioyek
 picktool = papis-tui
-mark-opener = zathura -P {mark[value]}
+mark-opener = sioyek --page {mark[value]}
 file-browser = vifm

 # edit info.yaml as new papers are added
--- a/writing/.config/papis/scripts/papis-tags
+++ b/writing/.config/papis/scripts/papis-tags
@ -14,7 +14,10 @@ from papis.database.base import Database
 from papis.document import Document

 parser = argparse.ArgumentParser()
-parser.add_argument("query", nargs="*", help="the query to search for")
+parser.add_argument(
+    "--count", "-c", help="the query to search for", action="store_true"
+)
+parser.add_argument("query", nargs="*", help="the query to search for", default="*")
 args = parser.parse_args()


@ -22,7 +25,7 @@ def main(db: Database, args) -> None:
    query = " ".join(args.query)
    docs: list[Document] = db.query(query)

-    all_tags: set[str] = set()
+    all_tags: dict[str, int] = {}
    for doc in docs:
        t: list[str] | str = doc.get("tags", "")
        tags = (
@ -30,10 +33,25 @@ def main(db: Database, args) -> None:
        )

        for tag in tags:
-            all_tags.add(tag)
+            if tag == '':
+                continue
+            all_tags[tag] = all_tags.get(tag, 0) + 1

+    if args.count:
+        print_tags_and_counts(all_tags)
+    else:
+        print_tags_only(all_tags)
+
+def print_tags_only(all_tags):
    for tag in sorted(all_tags):
        print(tag)

+def print_tags_and_counts(all_tags):
+    for tag, count in sorted(all_tags.items(), key=lambda d: d[1], reverse=True):
+        if args.count:
+            print(tag, count)
+        else:
+            print(tag)
+
 if __name__ == "__main__":
    main(database.get(), args)
--- a/writing/.config/sioyek/keys_user.config
+++ b/writing/.config/sioyek/keys_user.config
@ -0,0 +1,30 @@
+noop <C-w>
+open_document_embedded o
+
+toggle_custom_color <C-r>
+
+goto_begining gg
+goto_end G
+
+screen_up <C-u>
+screen_down <C-d>
+previous_page <C-b>
+next_page <C-f>
+
+next_state L
+prev_state H
+
+fit_to_page_width S
+fit_to_page_width_smart s
+fit_to_page_height a
+fit_to_page_height_smart A
+
+embed_annotations <C-s>
+
+toggle_statusbar <C-n>
+
+keyboard_select;add_highlight_with_current_type V
+
+regex_search /
+copy y
+rotate_clockwise R
--- a/writing/.config/sioyek/prefs_user.config
+++ b/writing/.config/sioyek/prefs_user.config
@ -0,0 +1,26 @@
+# START FLAVOURS
+# base16-sioyek (https://github.com/loiccoyle/base16-sioyek)
+# by Loic Coyle
+# Gruvbox dark, soft scheme byDawid Kurek (dawikur@gmail.com), morhetz (https://github.com/morhetz/gruvbox)
+
+custom_background_color #32302f
+custom_text_color #ebdbb2
+
+page_separator_color #32302f
+search_highlight_color #fabd2f
+status_bar_color #32302f
+status_bar_text_color #ebdbb2
+ui_text_color #ebdbb2
+ui_selected_text_color #ebdbb2
+ui_background_color #3c3836
+ui_selected_background_color #665c54
+background_color #32302f
+visual_mark_color 0.40 0.36 0.33 0.2
+text_highlight_color #665c54
+link_highlight_color #83a598
+synctex_highlight_color #fb4934
+# END FLAVOURS
+
+super_fast_search 1
+startup_commands toggle_custom_color
+
--- a/writing/README.md
+++ b/writing/README.md
@ -2,6 +2,7 @@

 [bibtex](https://en.wikipedia.org/wiki/BibTeX) - plain-text reference management
 [zathura](git.pwmt.org) - keyboard-driven PDF reading
+[sioyek](http://sioyek.info/) - keyboard-driven PDF reading *and annotating*

 This readme is a little out of date, as are the scripts below.
 They are old, I used them during my time as a student and they are probably written terribly.
Author	SHA1	Message	Date
Marty Oehme	065488e57d	nvim: Remove debug printing of activated python venv Removed notification on activating a python venv. It should just work, transparent to the user and we do not need a big ol' notification each time we enter a file.	2023-10-02 19:21:29 +02:00
Marty Oehme	bfb62e6783	nvim: Add markdown code evaluation mappings Can edit (`<ll>ce`), jump-to (`]c`, `[c`), insert (`<ll>co`, `<ll>cO`) and run (`<ll>cc`) code cells in markdown files. They will not be evaluated as part of an overall repl but only stand-alone!	2023-10-02 19:20:44 +02:00
Marty Oehme	8b603b8c66	nvim: Improve lazy-loading of select plugins Aerial (on command), test-runners (on python only) and other plugins are now only loaded when actually required.	2023-10-02 19:18:29 +02:00
Marty Oehme	643deaebec	papis: Add ability to show tag counts to papis-tags The `papis tags` command is extended with the functionality to not just display all tags used in current query, sorted alphabetically, but also to display how often they appear. Use `papis tags -c` to show a space-separated count of how often each tag is used next to the tag name, in descending order.	2023-10-02 19:16:23 +02:00
Marty Oehme	c4809c78f7	vidl: Use new default video location	2023-10-02 19:14:50 +02:00
Marty Oehme	587a46ccb7	qutebrowser: Disable canvas fingerprinting Do not allow html5 canvas reading in qutebrowser. This shuts off one of the main avenues of browser fingerprinting (aside from cookies) still currently undertaken. It will possibly stop some obscure streaming sites from working but I do not care, especially at the cost of fingerprinting information.	2023-10-02 19:14:25 +02:00
Marty Oehme	48229fc742	qutebrowser: Set tab display length to 2 seconds When not showing tabs (only displaying them on actually switchting between tabs), so far the duration that the tabs would be displayed was just 800ms, way too short to actually provide legible info. This commit changes it to 2000ms, which may still be too short but is at least more digestible.	2023-10-02 19:12:56 +02:00
Marty Oehme	093bc811d5	multimedia: Add simple imv configuration Added simple configuration for the imv image viewer which is wayland-compatible. Nothing too fancy but some simple vim-like mappings are set, as well as some styling applied.	2023-10-02 19:11:20 +02:00
Marty Oehme	0fcac78b1f	git: Add date-enabled short log aliases In addition to the existing `glg` and `glga` aliases for showing one-line git logs for current or all branches, this commit adds `glgd` and `glgad` for showing one-line git logs for current or all branches with date information. The date info comes from authoring date not committing date.	2023-10-02 19:10:27 +02:00
Marty Oehme	ec74d0ddff	xdg: Change default video directory location Changed from ~/videos to ~/media/videos to declutter home somewhat.	2023-10-02 19:08:40 +02:00
Marty Oehme	bad45b937d	river: Do not always restart kanshi with river Kanshi used to be restarted every time river would be reloaded. This is not desired however, as restarting river would also kill the kanshi daemon, and subsequently reload it, reseting any custom kanshi output layouts or options set. With this commit kanshi only gets started if it is not already running through river (i.e. on first boot most of the time).	2023-10-02 19:07:58 +02:00
Marty Oehme	e98d527f5d	river: Add gap toggling key bind Use F10 to enable gaps (default) or Shift+F10 to disable gaps. TODO Would love to make it a toggle on pressing F10 alone, but I am not sure we can get the current gap width from the layout in any way.	2023-10-02 19:05:58 +02:00
Marty Oehme	6bca05f212	river: Make volume and brightness keys repeatable Will rapidly increase/decrease brightness and volume when holding down the corresponding keys.	2023-10-02 19:01:31 +02:00
Marty Oehme	102cdbca1c	writing: Replace zathura with sioyek Replaced or extended all default references to zathura with sioyek so it will automatically take on any tasks meant for pdf reading. With the current configuration, hardly a change should be noticed.	2023-10-02 14:08:04 +02:00
Marty Oehme	af410c0b77	writing: Add sioyek configuration	2023-10-02 13:55:46 +02:00
Marty Oehme	334f3032e8	terminal: Exchange fasd for zoxide fasd is unmaintained and slower than zoxide. The transferral was painless. I imported my old database and can continue as before. It does not care about files but that is completely fine for me. Same `z` invocation as before. Has the 'interactive' mode on `zi` which is also completely fine.	2023-09-28 14:41:33 +02:00
Marty Oehme	bf2e74265c	nvim: Auto format prose soft with word-linebreaks Automatically set formatting mode to soft for markdown, text and asciidoc files. Also automatically format on startup (no lazy-loading), and thus have nicely word-ending linebreaks (a word will not just be cut off wherever the line is over but will be fully moved to the next line instead).	2023-09-25 19:54:38 +02:00
Marty Oehme	490232d18a	nvim: Update plugins	2023-09-25 19:44:11 +02:00
Marty Oehme	dfb9d7ff01	timewarrior: Add hash and plus to taskwarrior tags Add a hash sign in front of 'project' tags received from taskwarrior (i.e. where it is `project:something` it will end up as #something in timewarrior. Similarly, add a plus sign in front of tags: `+mytag`. Only descriptions will be left as-is in translating from taskwarrior to timewarrior. This should make finding tags and projects specifically much easier in timewarrior (e.g. for counting up the total time spent on a single project).	2023-09-25 19:43:58 +02:00
Marty Oehme	23793795d6	nvim: Add coverage support for python testing Use `,tp` to load a coverage report and show it in the gutter. Use `,tP` to toggle it off and on. Use `,ts` to show a summary instead.	2023-09-25 19:41:27 +02:00
Marty Oehme	497b19fcbe	nvim: Add util function to grab plugin conditionally	2023-09-25 19:39:51 +02:00
Marty Oehme	41934d3000	nvim: Attach ruff client to active python environment	2023-09-25 19:38:57 +02:00
Marty Oehme	8a5381a4aa	nvim: Add test setup for python to ide Added neotest with some mappings to run tests and view outputs, as well as neotest-python for now to make it work under python. Added registering with which-key if it exists.	2023-09-23 08:37:29 +02:00
Marty Oehme	e016b0a056	nvim: Remap lsp go to next/previous error Mapped to `[D` / `]D`, reflecting the capitalization of going to the next general diagnostic (`[d`/`]d`). Now it is similar to spelling mistakes and spelling errors (`]s[s`/`]S[S` respectively).	2023-09-23 07:43:49 +02:00
Marty Oehme	dc9f9373fe	nvim: Remove obsolete mappings Removed easyread and nabla toggles since the plugins are removed.	2023-09-23 07:41:37 +02:00