writing: Replace zathura with sioyek

Replaced or extended all default references to zathura with
sioyek so it will automatically take on any tasks meant
for pdf reading. With the current configuration, hardly a
change should be noticed.

bootstrap/packages_stable.tsv

@@ -274,6 +274,7 @@ screen	Full-screen window manager that multiplexes a physical terminal	R
 sfz	A simple static file server	A	
 shellcheck-bin	Shell script analysis tool (binary release, static)	A	
 shfmt	Format shell programs	R	
+sioyek	PDF viewer for research papers and technical books.	A	
 slurp	Select a region in a Wayland compositor	R	
 smartmontools	Control and monitor S.M.A.R.T. enabled ATA and SCSI Hard Drives	R	
 snap-pac	Pacman hooks that use snapper to create pre/post btrfs snapshots like openSUSE's YaST	R	

sh/.config/sh/env

@@ -35,7 +35,7 @@ export BROWSER="qutebrowser"
 export TERMINAL="wezterm"
 export PAGER="less"
 
-export FILEREADER="zathura"
+export FILEREADER="sioyek"
 export FILEMANAGER="vifm"
 
 ## gopath

terminal/.config/vifm/vifmrc

@@ -358,7 +358,7 @@ set classify+=' ::*.doc,,*.docx::, ::*.xls,,*.xls[mx]::, ::*.pptx,,*.pp
 " Pdf
 filextype *.pdf
         \ { view as rich file }
-        \ zathura %c %i &, apvlv %c, xpdf %c,
+        \ sioyek %c %i, zathura %c %i &, apvlv %c, xpdf %c,
         \ { edit text content }
         \ pdftotext -nopgbrk %c - | nvim
 fileviewer *.pdf pdftotext -nopgbrk %c -
@@ -366,14 +366,14 @@ fileviewer *.pdf pdftotext -nopgbrk %c -
 " PostScript
 filextype *.ps,*.eps,*.ps.gz
         \ {View in zathura}
-        \ zathura %f,
+        \ sioyek %f, zathura %f,
         \ {View in gv}
         \ gv %c %i &,
 
 " Djvu
 filextype *.djvu,*.epub
         \ {View in zathura}
-        \ zathura %f,
+        \ sioyek %f, zathura %f,
         \ {View in apvlv}
         \ apvlv %f,
 

writing/.config/papis/config

@@ -3,9 +3,9 @@ default-library = main
 formater = bbt
 local-config-file = .papis.config
 
-# opentool = zathura
+opentool = sioyek
 picktool = papis-tui
-mark-opener = zathura -P {mark[value]}
+mark-opener = sioyek --page {mark[value]}
 file-browser = vifm
 
 # edit info.yaml as new papers are added

writing/README.md

@@ -2,6 +2,7 @@
 
 [bibtex](https://en.wikipedia.org/wiki/BibTeX) - plain-text reference management
 [zathura](git.pwmt.org) - keyboard-driven PDF reading
+[sioyek](http://sioyek.info/) - keyboard-driven PDF reading *and annotating*
 
 This readme is a little out of date, as are the scripts below.
 They are old, I used them during my time as a student and they are probably written terribly.