Marty Oehme
a854794a43
chore(repo): Move scripts to src directory
2023-12-07 21:16:12 +01:00
Marty Oehme
76ff71765c
chore(script): Lowercase all df columns
...
In preparation for the processed sample renamed all columns to
their lowercase versions.
2023-12-07 20:40:54 +01:00
Marty Oehme
d88c733b6d
feat(data): Prepare loading WB country group data
2023-12-07 20:11:27 +01:00
Marty Oehme
8f0f57edcc
feat(script): Begin adding spatial inequality section
2023-12-07 16:56:18 +01:00
Marty Oehme
1589b8c6fb
feat(data): Extract Kuriyama2021
2023-12-07 16:53:51 +01:00
Marty Oehme
c96d34e972
feat(data): Extract SilveiraNeto2011
2023-12-07 16:04:26 +01:00
Marty Oehme
b7bb04b7dc
feat(data): Extract Gilbert2001
2023-12-07 15:30:33 +01:00
Marty Oehme
7248a07ec1
feat(data): Extract Blumenberg2014
2023-12-07 14:38:16 +01:00
Marty Oehme
343de33552
chore(data): Switch to -1/0/1 coding for impact direction
...
So we can also express simply no relation between the variables in
any direction.
2023-12-07 14:36:39 +01:00
Marty Oehme
0c70a4a2b1
feat(data): Extract Adam2018
2023-12-07 13:56:23 +01:00
Marty Oehme
446db080f6
chore(code): Refactor yml loading code
...
Fix for new paths and restructure to have the from_yml and to_tsv
functions in the same data loading file.
Improved path behavior to resolve any paths to absolutes before
loading.
2023-12-07 13:04:29 +01:00
Marty Oehme
d3a6b1296b
chore(repo): Move extracted yml data to processed dir
...
Since it has been processed it should reside in the processed dir
2023-12-07 12:44:00 +01:00
Marty Oehme
4cc1fb8b34
chore(data): Update bib file associations
2023-12-07 12:40:44 +01:00
Marty Oehme
11ce772809
feat(data): Update query to actual WOS undertaken
2023-12-07 11:21:24 +01:00
Marty Oehme
90b23349b4
feat(notes): Ensure notes use embedded query
2023-12-07 11:21:10 +01:00
Marty Oehme
7329540465
feat(script): Move query to imported file
...
Moved search query to file which is imported and acts as
single source of truth for script, notes, etc.
2023-12-07 11:20:02 +01:00
Marty Oehme
1e4817196c
chore(script): Rename data paths
2023-12-07 11:20:01 +01:00
Marty Oehme
12704e64f5
feat(repo): Add edit task to poe
2023-12-07 11:06:48 +01:00
Marty Oehme
6130c79c53
feat(script): Add first gender annotations
2023-12-07 11:06:10 +01:00
Marty Oehme
9df67f6189
chore(data): Update bibkeys and files
2023-12-07 10:49:25 +01:00
Marty Oehme
ce2a231478
feat(data): Extract Stock2021
2023-12-07 10:49:08 +01:00
Marty Oehme
52f9d8635f
feat(repo): Add task runner for common operations
...
Set up poethepoet for quarto rendering and previewing.
Can be invoked through `poetry preview` or `poetry render`.
Will for now only preview the main scoping review file.
2023-12-07 09:30:16 +01:00
Marty Oehme
fae59c5a7d
chore(repo): Update quarto html rendering
2023-12-07 09:21:30 +01:00
Marty Oehme
ff4af556a5
feat(scripts): Add figure for intervention and inequality types
2023-12-07 09:05:04 +01:00
Marty Oehme
3a4a7b5621
chore(scripts): Move notes to notes.qmd file
...
Required for computational cells to be executed by quarto.
Also imported all the standard stuff for python ds to work.
2023-12-06 23:25:42 +01:00
Marty Oehme
b7e76b635a
chore(data): Add missing intervention type tags
2023-12-06 21:31:25 +01:00
Marty Oehme
6020d122b6
feat(script): Switch term tables to data driven design
...
Moved term tables to data directory as csv files and included them
in main script from there, to function as single source of truth.
2023-12-06 17:38:54 +01:00
Marty Oehme
92a1162dce
chore(notes): Notify on source of truth for extraction
...
Added small note on actual source of truth for extraction data in
data directory.
2023-12-06 17:12:38 +01:00
Marty Oehme
e8842144bd
feat(notes): Integrate dynamic inclusion criteria table
...
Add same source-of-trugh inclusion table as integrated in the main
text, sourced directly form tsv in the data directory.
2023-12-06 17:09:52 +01:00
Marty Oehme
5cb794e1b5
chore(data): Add irrelevant extraction data deGeus2022
2023-12-06 17:06:20 +01:00
Marty Oehme
193f4d3b35
chore(notes): Make screening tool tags lists
2023-12-06 17:05:55 +01:00
Marty Oehme
6cd77a4909
feat(notes): Add global region to tags
2023-12-06 16:56:03 +01:00
Marty Oehme
7a3ed53ea1
fix(script): Correctly import relevant bibtex entries
2023-12-06 16:42:32 +01:00
Marty Oehme
1b660f9621
fix(script): Correct display of inclusion criteria table
2023-12-06 16:42:00 +01:00
Marty Oehme
d9cd5fad1a
feat(script): Add dynamic inclusion criteria table
...
In order to pursue single source of truth, we now
explicitly integrate the inclusion criteria table
from a tsv file in the data directory in the main
manuscript. Other locations should also make use
of that file to create their table.
2023-12-06 16:13:00 +01:00
Marty Oehme
b5c0df16e3
feat(script): Add dynamic screening flowchart
...
Added mermaid flowchart showing the screening numbers, based on
dynamic calculations done at document rendering. Currently missing
some calculations (un-deduplicated numbers and final relevant number).
2023-12-06 16:13:00 +01:00
Marty Oehme
c7ac283ad5
feat(data): Unify interventions for childcare subsidy
2023-12-06 16:09:53 +01:00
Marty Oehme
b574084023
chore(code): Update live zotero citation plugin
2023-12-06 16:09:47 +01:00
Marty Oehme
46fa835d13
chore(data): Add working sample bibtex to repo data
...
Added bibtex file containing the up-to-date working sample of the Zotero
library to data/intermediate. It can be used to count sources based on
their keywords such as how many were sorted out during which step,
which regions they belong to and so on.
2023-12-06 16:04:09 +01:00
Marty Oehme
3c6e166568
chore(data): Remove exploratory query data
2023-12-06 14:24:48 +01:00
Marty Oehme
4c493db50c
feat(data): Extract Hojman2019
2023-12-06 13:00:26 +01:00
Marty Oehme
8a3a244c54
feat(data): Extract Clark2019
2023-12-06 12:10:25 +01:00
Marty Oehme
6e8a7f2a1f
feat(data): Extract Broadway2020
2023-12-06 11:40:31 +01:00
Marty Oehme
2a3d282587
chore(data): Update lib
2023-12-06 11:16:22 +01:00
Marty Oehme
81720563cb
feat(data): Extract Chao2022
2023-12-06 11:16:22 +01:00
Marty Oehme
8c579315df
feat(data): Add indicator used to Debowicz2014
2023-12-06 11:05:40 +01:00
Marty Oehme
2d45f26a1f
chore(data): Fix Sotomayor publication date in name
2023-12-06 10:13:08 +01:00
Marty Oehme
40a3df132a
chore(repo): Fix links to bibtex file
...
Fixed any relative links to the bibtex file for generating annotations
or similar.
2023-12-05 16:42:20 +01:00
Marty Oehme
82b0453187
chore(repo): Move supplementary data to data dir
...
Since we now have a 'documentation' directory instead of a
'supplementary-data' one, actual supplementary data should
move to the actual data directory, which is what it does
with this commit.
2023-12-05 16:38:46 +01:00
Marty Oehme
3482115546
chore(repo): Rename supp data to documentation dir
...
We predominantly keep documentation in here, so that is what it
should be called.
2023-12-05 16:37:43 +01:00
Marty Oehme