feat(script): Show all years for pubs per year figure

pyproject.toml

@@ -16,7 +16,7 @@ tabulate = "^0.9.0"
 openpyxl = "^3.1.2"
 
 [tool.poetry.group.dev.dependencies]
-pynvim = "^0.4.3"
+pynvim = "^0.5.0"
 pyperclip = "^1.8.2"
 poethepoet = "^0.24.4"
 
@@ -26,6 +26,8 @@ build-backend = "poetry.core.masonry.api"
 
 [tool.ruff]
 ignore = ["E402"]
+[tool.pyright]
+typeCheckingMode="basic"
 
 [tool.poe]
 poetry_command = ""

scoping_review.qmd

@@ -496,13 +496,16 @@ df_study_years = (
     .first()
     .reset_index()
     .drop_duplicates()
+    ["year"].value_counts()
+    .sort_index()
 )
-# FIXME potentially timeseries plot so no years are missing
-ax = sns.countplot(df_study_years, x="year")
+# use order to ensure all years are displayed, even ones without values
+years_range = list(range(df_study_years.index.min(), df_study_years.index.max()+1))
+ax = sns.barplot(df_study_years, order=years_range)
 
-ax.tick_params(axis='x', rotation=45)
 ax.set_ylabel("Count")
 ax.set_xlabel("Year")
+plt.setp(ax.get_xticklabels(), rotation=45, ha="right", rotation_mode="anchor") # ensure rotated right-anchor
 plt.tight_layout()
 plt.show()
 df_study_years = None