chore: Fix black fmt

Will turn off looking for duplicate annotations and simply add all.

papis_extract/__init__.py

@@ -8,10 +8,7 @@ import papis.strings
 from papis.document import Document
 
 from papis_extract import extractor, exporter
-from papis_extract.formatter import (
+from papis_extract.formatter import Formatter, formatters
-    Formatter,
-    formatters
-)
 
 logger = papis.logging.get_logger(__name__)
 
@@ -68,6 +65,7 @@ def main(
     write: bool,
     template: str,
     git: bool,
+    force: bool,
 ) -> None:
     """Extract annotations from any pdf document.
 
@@ -89,7 +87,7 @@ def main(
 
     formatter = formatters[template]
 
-    run(documents, edit=manual, write=write, git=git, formatter=formatter)
+    run(documents, edit=manual, write=write, git=git, formatter=formatter, force=force)
 
 
 def run(
@@ -98,11 +96,12 @@ def run(
     edit: bool = False,
     write: bool = False,
     git: bool = False,
+    force: bool = False,
 ) -> None:
     annotated_docs = extractor.start(documents)
     if write:
         exporter.to_notes(
-            formatter=formatter, annotated_docs=annotated_docs, edit=edit, git=git
+            formatter=formatter, annotated_docs=annotated_docs, edit=edit, git=git, force=force
         )
     else:
         exporter.to_stdout(formatter=formatter, annotated_docs=annotated_docs)

papis_extract/exporter.py

@@ -67,7 +67,7 @@ def _add_annots_to_note(
     :type formatted_annotations: list[str]
     :param git: Flag indicating whether to commit changes to git, defaults to False.
     :type git: bool, optional
-    :param force:  Flag indicating whether to force adding annotations even if they 
+    :param force:  Flag indicating whether to force adding annotations even if they
         already exist, defaults to False.
     :type force: bool, optional
     """

tests/test_annotation.py

@@ -26,13 +26,14 @@ def test_formatting_replacements(fmt_string, expected):
 
     assert sut.format(fmt_string) == expected
 
+
 @pytest.mark.parametrize(
     "fmt_string,expected",
     [
         ("{{doc.title}}", "document-title"),
         ("{{doc.title}}-{{doc.author}}", "document-title-document-author"),
         ("{{quote}} ({{doc.author}})", "I am the text value (document-author)"),
-    ]
+    ],
 )
 def test_formatting_document_access(fmt_string, expected):
     sut = Annotation(
@@ -40,10 +41,11 @@ def test_formatting_document_access(fmt_string, expected):
         text="I am the text value",
         content="Whereas I represent the note",
     )
-    doc = Document(data= {"title": "document-title", "author": "document-author"})
+    doc = Document(data={"title": "document-title", "author": "document-author"})
 
     assert sut.format(fmt_string, doc=doc) == expected
 
+
 def test_colorname_matches_exact():
     sut = Annotation("testfile", colors=(1.0, 0.0, 0.0), minimum_similarity_color=1.0)
     c_name = sut.colorname