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68 commits

Author SHA1 Message Date
b5c081fbf3
feat: Change count display to lead with count
The actual count is now the first item on each line,
to make it easier to sort, strip, delete and compare
afterwards.
2024-06-12 11:16:13 +02:00
d087c366c3
chore: Refactor markdown format string handling 2024-06-12 11:05:13 +02:00
c21ab4a76c
chore: Update dependencies
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Pin new versions of levenshtein and pymupdf to fix build process.

This also means updating from importing fitz to importing pymupdf soon
in the source.
2024-05-07 10:55:14 +02:00
5526b3d2c5
docs: Update limitation information 2024-05-07 10:54:11 +02:00
905b20a79c
fix: Default markdown atx formatter for note exporter
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2024-01-25 22:46:38 +01:00
163fd63038
fix: Fixed pocketbook extractor trying to read all files
The complete read routine would work before figuring out that it is
a file of xml mimetype. This means that it would try to read to memory
any file as the first thing, pdfs, even binaries. Of course doing
so crashed the program.
2024-01-25 21:42:34 +01:00
72ddaaf1bc
refactor: Extract exporters to separate module 2024-01-25 21:42:33 +01:00
c8e8453b68
feat: Add advanced pocketbook detection heuristic
Added heuristic which checks for the existence of a specific
meta tag written to the pocketbook XHTML file.
2024-01-24 14:57:10 +01:00
6a8f8a03bc
refactor: Extract pocketbook file opening method 2024-01-24 14:55:28 +01:00
86d53a19d4
chore: Fix import lint error 2024-01-24 13:39:01 +01:00
c2a5190237
refactor: Improve module availability checks
Followed ruff (Pyflakes) suggestion to use importlib utils directly
instead of try and erroring with imports.
2024-01-24 12:27:21 +01:00
2f41906e6a
docs: Add extractor and install info
Added extractor info for the two currently existing extractors.
Added install recommendation for pipx.
2024-01-24 12:21:51 +01:00
e7e5258b34
feat: Only activate pocketbook extractor optionally
Since we make the dependencies for pocketbook html extraction optional
as an extra, this commit ensures the extractor (and cli option) only
gets loaded when they exist.
2024-01-24 12:07:04 +01:00
e1e09b6011
chore: Format pyproject 2024-01-24 12:05:41 +01:00
f6c0189529
fix: Tag automation on tag creation
Tagging by color only worked on manually invoking the
`annotation.color = ()` setter. Now it works on initial
instance creation.
2024-01-24 11:20:00 +01:00
333bd279b9
fix: Fix test fixtures for new annotation structure 2024-01-24 11:15:10 +01:00
67bfc30396
refactor: Switch annotation away from dataclass
To ease employing getters and setters, we switch the dataclass
to a normal python undecorated class.
2024-01-24 11:15:10 +01:00
f4a26292a0
fix: Remove debug print statement 2024-01-24 11:13:35 +01:00
c53cd563b7
feat: Add pocketbook extraction 2024-01-24 08:56:21 +01:00
ddb34fca7b
refactor: Move tagging by color to Annotation 2024-01-24 08:53:54 +01:00
3bd6247888
chore: Add license and dev instructions 2024-01-23 10:15:51 +01:00
11d570f9d8
refactor: Rename annotation content variables
Renamed the two variables describing an annotation's highlighted PDF-text and
its appended note if any exists. Previously called 'text' (for the in-PDF
highlighted content) and 'content' (for the additional supplied content).

Now they are called 'content' for the IN PDF words, highlighted.
and 'note' for the appended note given (or not) in an annotation.
2024-01-23 09:54:36 +01:00
9169e1c98a
chore: Improve stdout newline handling
Always strip all newlines of the end of all entries, and then add
a single newline back between entries.
2024-01-23 09:49:31 +01:00
2880c06f53
chore: Improve cli option help texts
Fixed the write option text to be without wrong negation.
Show default settings for flag options.
2024-01-23 09:27:26 +01:00
a51205954c
refactor: Extract extractor list to extractor module 2024-01-23 09:21:46 +01:00
629932a5e8
feat: Loop through all chosen extractors 2024-01-23 09:10:42 +01:00
f477deea7c
feat: Add extractor cli choice
Can only choose pdf for the time being, but allows additional
extractors to be added in the future.
2024-01-23 08:58:32 +01:00
3b4db7b6b8
refactor: Extract PDF extractor into class
Extractor is a general protocol with the PDF extraction routine now being
one implementation of the protocol. Preparation for adding multiple
extractors (epub,djvu, or specific progammes) in the future.
2024-01-20 18:02:51 +01:00
765de505bb
refactor: Remove AnnotatedDocument class
The AnnotatedDocument class was, essentially, a simple tuple of a document
and a list of annotations. While not bad in a vacuum, it is unwieldy and
passing this around instead of a document, annotations, or both where
necessary is more restrictive and frankly unnecessary.

This commit removes the data class and any instances of its use. Instead,
we now pass the individual components around to anything that needs them.
This also frees us up to pass only annotations around for example.

We also do not iterate through the selected papis documents to work on
in each exporter anymore (since we only pass a single document), but
in the main function itself. This leads to less duplication and makes
the overall run function the overall single source of iteration through
selected documents. Everything else only knows about a single document -
the one it is operating on - which seems much neater.

For now, it does not change much, but should make later work on extra
exporters or extractors easier.
2024-01-20 16:36:24 +01:00
cd5f787220
chore: Update dependencies to fix single-thread warning
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Fixed single-threaded warning provided from the fitz pymupdf library
since the issue does not exist for this new version anymore.
Bump version along the way.
2024-01-18 18:26:00 +01:00
1ef9a91e55
test: Remove deprecated pipeline instruction
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2024-01-06 11:15:51 +01:00
376282eaaa
test: Fix test running on main branch
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2023-10-17 22:09:54 +02:00
5cd5a05062
chore: Fix black fmt
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2023-10-17 22:07:09 +02:00
aeb18ae358
feat: Add option to force-add annotations
Will turn off looking for duplicate annotations and simply add all.
2023-10-17 22:05:11 +02:00
14f1b9e75c
test: Add poetry-cov library 2023-10-17 21:16:40 +02:00
c9736a5f32
test: Add tests for formatter sad paths 2023-10-12 19:27:16 +02:00
f67ac8cdb3
chore: Fix markdown lint issues 2023-10-12 19:26:41 +02:00
2700e4adc3
test: Add code coverage dev dependency 2023-09-22 21:53:55 +02:00
1e29642cba
test: Fix formatting and annotation tests 2023-09-22 21:49:52 +02:00
ee4690f52b
feat: Add atx-style markdown
Added markdown with atx style headers, can be chosen as
alternative markdown template on the cli.
The existing 'markdown' template will still default to
setext-style headers.
2023-09-21 22:05:39 +02:00
7ee8d4911e
refactor: Make formatters functions
Formatters have been classes so far which contained some data (the
tamplate to use for formatting and the annotations and documents to
format) and the actual formatting logic (an execute function).

However, we can inject the annotations to be formatted and the templates
so far are static only, so they can be simple variables (we can think
about how to inject them at another point should it come up, no
bikeshedding now).

This way, we can simply pass around one function per formatter, which
should make the code much lighter, easier to add to and especially less
stateful which means less areas of broken interactions to worry about.
2023-09-21 21:54:24 +02:00
929e70d7ac
chore: Update poetry.lock 2023-09-21 19:36:00 +02:00
31b878c9eb
refactor: Move Annotations into annotation module 2023-09-20 17:22:29 +02:00
3670f70319
docs: Add formatting documentation
Added documentation on using output templates and that they will
invalidate the 'existing' annotation search.
2023-09-20 09:15:00 +02:00
e511ffa48d
feat: Add CSV formatter
Added formatter for csv-compatible syntax. The formatting is quite basic
with no escaping happening should that be necessary. However, for an
initial csv output it suffices for me.
2023-09-20 09:15:00 +02:00
5f0bc2ffad
feat: Add count formatter
Added formatter which counts and outputs the number of
annotations in each document.
2023-09-20 09:14:59 +02:00
5a6d672c76
refactor: Move formatting logic to formatters
Formatters (previously templates) were pure data containers before,
continating the 'template' for how things should be formatted using
mustache. The formatting would be done a) in the exporters and b) in the
annotations.

This spread of formatting has now been consolidated into the Formatter,
which fixes the overall spread of formatting code and now can coherently
format a whole output instead of just individual annotations.

A formatter contains references to all documents and contained
annotations and will format everything at once by default, but the
formatting function can be invoked with reference to a specific
annotated document to only format that.

This commit should put more separation into the concerns of exporter and
formatter and made formatting a concern purely of the formatters and
annotation objects.
2023-09-20 09:14:58 +02:00
66f937e2a8
test: Add local papis settings for testing 2023-09-20 09:14:55 +02:00
cbe2e7cb03
feat: Allow cli option for template choice 2023-09-20 09:14:54 +02:00
9674592a9f
docs: Add developer notes to README 2023-09-20 09:14:43 +02:00