initial commit

.gitignore

@@ -0,0 +1,230 @@
+/temp/
+
+# Created by https://www.toptal.com/developers/gitignore/api/-f,python,linux,vim,quarto,markdown,jupyternotebooks
+# Edit at https://www.toptal.com/developers/gitignore?templates=-f,python,linux,vim,quarto,markdown,jupyternotebooks
+
+#!! ERROR: -f is undefined. Use list command to see defined gitignore types !!#
+
+### JupyterNotebooks ###
+# gitignore template for Jupyter Notebooks
+# website: http://jupyter.org/
+
+.ipynb_checkpoints
+*/.ipynb_checkpoints/*
+
+# IPython
+profile_default/
+ipython_config.py
+
+# Remove previous ipynb_checkpoints
+#   git rm -r .ipynb_checkpoints/
+
+### Linux ###
+*~
+
+# temporary files which can be created if a process still has a handle open of a deleted file
+.fuse_hidden*
+
+# KDE directory preferences
+.directory
+
+# Linux trash folder which might appear on any partition or disk
+.Trash-*
+
+# .nfs files are created when an open file is removed but is still being accessed
+.nfs*
+
+#!! ERROR: markdown is undefined. Use list command to see defined gitignore types !!#
+
+### Python ###
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+cover/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+.pybuilder/
+target/
+
+# Jupyter Notebook
+
+# IPython
+
+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
+#   intended to run in multiple environments; otherwise, check them in:
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# poetry
+#   Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#   https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
+#poetry.lock
+
+# pdm
+#   Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
+#pdm.lock
+#   pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it
+#   in version control.
+#   https://pdm.fming.dev/#use-with-ide
+.pdm.toml
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
+
+# Cython debug symbols
+cython_debug/
+
+# PyCharm
+#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+#.idea/
+
+### Python Patch ###
+# Poetry local configuration file - https://python-poetry.org/docs/configuration/#local-configuration
+poetry.toml
+
+# ruff
+.ruff_cache/
+
+# LSP config files
+pyrightconfig.json
+
+#!! ERROR: quarto is undefined. Use list command to see defined gitignore types !!#
+
+### Vim ###
+# Swap
+[._]*.s[a-v][a-z]
+!*.svg  # comment out if you don't need vector files
+[._]*.sw[a-p]
+[._]s[a-rt-v][a-z]
+[._]ss[a-gi-z]
+[._]sw[a-p]
+
+# Session
+Session.vim
+Sessionx.vim
+
+# Temporary
+.netrwhist
+# Auto-generated tag files
+tags
+# Persistent undo
+[._]*.un~
+
+# End of https://www.toptal.com/developers/gitignore/api/-f,python,linux,vim,quarto,markdown,jupyternotebooks

.woodpecker/lint.yml

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+pipeline:
+  lint_ruff:
+    image: python
+    commands:
+      - pip install ruff
+      - python --version && poetry --version && ruff --version
+      - echo "----------------- running ruff lint ------------------"
+      - ruff check .
+
+  lint_black:
+    image: python
+    commands:
+      - pip install black
+      - python --version && poetry --version && black --version
+      - echo "----------------- running black lint ----------------"
+      - black --check .

.woodpecker/static_analysis.yml

@@ -0,0 +1,9 @@
+pipeline:
+  pyright:
+    image: nikolaik/python-nodejs
+    commands:
+      - npm install --global pyright
+      - poetry install
+      - python --version && poetry --version && pyright --version
+      - echo "------------- running pyright typecheck -------------"
+      - poetry run pyright

.woodpecker/test.yml

@@ -0,0 +1,10 @@
+branches: master
+
+pipeline:
+  pytest:
+    image: ghcr.io/withlogicco/poetry:1.5.1
+    commands:
+      - poetry install
+      - python --version && poetry --version
+      - echo "------------- running pytest -------------"
+      - poetry run pytest

README.md

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+# papis-bbt-formatter
+
+Formats reference keys in papis similarly to the (zotero plugin) `better-bibtex` keys, in the format `Name2008TitleShort`.
+## Installation:
+
+<!-- TODO set up pypi repository / explain git install path -->
+You can install from pypi with `pip install git+https://git.martyoeh.me/Marty/papis-bbt-formatter.git`.
+
+That's it! If you have papis and papis-bbt-formatter installed in the same environment (whether virtual or global),
+everything should now be installed.
+
+## Usage:
+
+In your papis configuration file (usually `~/.config/papis/config`), add the following under the main settings header:
+
+```toml
+[settings]
+formater = bbt
+ref-format = bbt
+```
+
+For now, the ref-format is simply `bbt` as well, though should I further develop this plugin (with additional options),
+that settings will surely change.
+
+Currently, you can change the length that the `TitleShort` in `Name2008TitleShort` will be cut down to by setting:
+
+```toml
+[settings]
+formater = bbt
+ref-format = bbt[4]
+```
+
+In this case, the title will be shortened to 4 words maximum (the default), change the number to shorten/lengthen to your preference.
+
+This plugin is a rather simple adaption from [this](https://github.com/hrdl-github/papis/commit/b9b9c6eaa3de159e1b210174ef49e90a89271eb8) commit,
+turned into an installable papis plugin and extended slightly for now.
+
+---
+
+If you spot a bug or have an idea feel free to open an issue.\
+I might be slow to respond but will consider them all!
+
+Pull requests are warmly welcomed.\
+If they are larger changes or additions let's talk about them in an issue first.
+
+Thanks for using my software ❤️

papis_bbt_formatter/__init__.py

@@ -0,0 +1,196 @@
+# adapted from https://github.com/hrdl-github/papis/commit/b9b9c6eaa3de159e1b210174ef49e90a89271eb8
+# with much gratitude.
+import re
+from typing import Any
+import papis.format
+import papis.config
+import papis.document
+
+import papis.logging
+
+logger = papis.logging.get_logger(__name__)
+
+DEFAULT_TITLE_LENGTH=4
+
+class BBTFormatter(papis.format.Formater):
+    """Provides zotero better-bibtex-like keys."""
+
+    def format(
+        self,
+        fmt: str,
+        doc: papis.format.FormatDocType,
+        doc_key: str = "",
+        additional: dict[str, Any] = {},
+    ) -> str:
+        if fmt.startswith("bbt"):
+            author_unfmt = (
+                doc["author_list"][0]["family"]
+                if "author_list" in doc
+                else doc["author"].split(maxsplit=1)[0]
+                if "author" in doc
+                else "Unkown"
+            )
+            title_unfmt = doc["title"] if "title" in doc else "No title"
+            year_unfmt = str(doc["year"]) if "year" in doc else "0000"
+
+            author = re.sub("[^a-z]+", "", author_unfmt.lower())
+            year = year_unfmt[-2:]
+            title = re.sub("-", " ", title_unfmt.lower())
+            title = re.sub("[^0-9a-z ]+", "", title)
+            title = list(
+                map(
+                    str.capitalize,
+                    filter(lambda word: word and word not in SKIP_WORDS, title.split()),
+                )
+            )
+            title_len = self._title_length(fmt)
+            title = "".join(title[:title_len])
+            return f"{author}{year}_{title}"
+        else:
+            return papis.format.PythonFormater().format(fmt, doc, doc_key, additional)
+
+    def _title_length(self, fmt: str) -> int:
+        """Returns the length (in words) the title should be shortened to."""
+        if match:=re.match(r'^bbt\[(\d+)\]', fmt):
+            return int(match.group(1))
+        return DEFAULT_TITLE_LENGTH
+
+SKIP_WORDS = set(
+    [
+        "about",
+        "above",
+        "across",
+        "afore",
+        "after",
+        "against",
+        "al",
+        "along",
+        "alongside",
+        "amid",
+        "amidst",
+        "among",
+        "amongst",
+        "anenst",
+        "apropos",
+        "apud",
+        "around",
+        "as",
+        "aside",
+        "astride",
+        "at",
+        "athwart",
+        "atop",
+        "barring",
+        "before",
+        "behind",
+        "below",
+        "beneath",
+        "beside",
+        "besides",
+        "between",
+        "beyond",
+        "but",
+        "by",
+        "circa",
+        "despite",
+        "down",
+        "during",
+        "et",
+        "except",
+        "for",
+        "forenenst",
+        "from",
+        "given",
+        "in",
+        "inside",
+        "into",
+        "lest",
+        "like",
+        "modulo",
+        "near",
+        "next",
+        "notwithstanding",
+        "of",
+        "off",
+        "on",
+        "onto",
+        "out",
+        "over",
+        "per",
+        "plus",
+        "pro",
+        "qua",
+        "sans",
+        "since",
+        "than",
+        "through",
+        " thru",
+        "throughout",
+        "thruout",
+        "till",
+        "to",
+        "toward",
+        "towards",
+        "under",
+        "underneath",
+        "until",
+        "unto",
+        "up",
+        "upon",
+        "versus",
+        "vs.",
+        "v.",
+        "vs",
+        "v",
+        "via",
+        "vis-à-vis",
+        "with",
+        "within",
+        "without",
+        "according to",
+        "ahead of",
+        "apart from",
+        "as for",
+        "as of",
+        "as per",
+        "as regards",
+        "aside from",
+        "back to",
+        "because of",
+        "close to",
+        "due to",
+        "except for",
+        "far from",
+        "inside of",
+        "instead of",
+        "near to",
+        "next to",
+        "on to",
+        "out from",
+        "out of",
+        "outside of",
+        "prior to",
+        "pursuant to",
+        "rather than",
+        "regardless of",
+        "such as",
+        "that of",
+        "up to",
+        "where as",
+        "or",
+        "yet",
+        "so",
+        "for",
+        "and",
+        "nor",
+        "a",
+        "an",
+        "the",
+        "de",
+        "d'",
+        "von",
+        "van",
+        "c",
+        "ca",
+    ]
+)

poetry.lock

@@ -0,0 +1,690 @@
+# This file is automatically @generated by Poetry 1.5.1 and should not be changed by hand.
+
+[[package]]
+name = "arxiv2bib"
+version = "1.0.8"
+description = "Get arXiv.org metadata in BibTeX format"
+optional = false
+python-versions = "*"
+files = [
+    {file = "arxiv2bib-1.0.8.tar.gz", hash = "sha256:137608ed8aa4da6594350152964b9b0f46c6efcb07f8a4dfd50309c968b647a8"},
+]
+
+[[package]]
+name = "beautifulsoup4"
+version = "4.12.2"
+description = "Screen-scraping library"
+optional = false
+python-versions = ">=3.6.0"
+files = [
+    {file = "beautifulsoup4-4.12.2-py3-none-any.whl", hash = "sha256:bd2520ca0d9d7d12694a53d44ac482d181b4ec1888909b035a3dbf40d0f57d4a"},
+    {file = "beautifulsoup4-4.12.2.tar.gz", hash = "sha256:492bbc69dca35d12daac71c4db1bfff0c876c00ef4a2ffacce226d4638eb72da"},
+]
+
+[package.dependencies]
+soupsieve = ">1.2"
+
+[package.extras]
+html5lib = ["html5lib"]
+lxml = ["lxml"]
+
+[[package]]
+name = "bibtexparser"
+version = "1.4.0"
+description = "Bibtex parser for python 3"
+optional = false
+python-versions = "*"
+files = [
+    {file = "bibtexparser-1.4.0.tar.gz", hash = "sha256:ca7ce2bc34e7c48a678dd49416429bb567441f26dbb13b3609082d8cd109ace6"},
+]
+
+[package.dependencies]
+pyparsing = ">=2.0.3"
+
+[[package]]
+name = "certifi"
+version = "2023.7.22"
+description = "Python package for providing Mozilla's CA Bundle."
+optional = false
+python-versions = ">=3.6"
+files = [
+    {file = "certifi-2023.7.22-py3-none-any.whl", hash = "sha256:92d6037539857d8206b8f6ae472e8b77db8058fec5937a1ef3f54304089edbb9"},
+    {file = "certifi-2023.7.22.tar.gz", hash = "sha256:539cc1d13202e33ca466e88b2807e29f4c13049d6d87031a3c110744495cb082"},
+]
+
+[[package]]
+name = "chardet"
+version = "5.2.0"
+description = "Universal encoding detector for Python 3"
+optional = false
+python-versions = ">=3.7"
+files = [
+    {file = "chardet-5.2.0-py3-none-any.whl", hash = "sha256:e1cf59446890a00105fe7b7912492ea04b6e6f06d4b742b2c788469e34c82970"},
+    {file = "chardet-5.2.0.tar.gz", hash = "sha256:1b3b6ff479a8c414bc3fa2c0852995695c4a026dcd6d0633b2dd092ca39c1cf7"},
+]
+
+[[package]]
+name = "charset-normalizer"
+version = "3.2.0"
+description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet."
+optional = false
+python-versions = ">=3.7.0"
+files = [
+    {file = "charset-normalizer-3.2.0.tar.gz", hash = "sha256:3bb3d25a8e6c0aedd251753a79ae98a093c7e7b471faa3aa9a93a81431987ace"},
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pyproject.toml

@@ -0,0 +1,21 @@
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