From 75717f837cb865a5568fe1bd3bfb7911df1c92bf Mon Sep 17 00:00:00 2001
From: Marty Oehme <marty.oehme@gmail.com>
Date: Fri, 22 Dec 2023 19:09:35 +0100
Subject: [PATCH] chore(code): By default use all processed data

---
 scoping_review.qmd | 2 +-
 src/data.py        | 2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/scoping_review.qmd b/scoping_review.qmd
index 7e05d1c..988da36 100644
--- a/scoping_review.qmd
+++ b/scoping_review.qmd
@@ -91,7 +91,7 @@ def countries_to_income_groups(countries:str):
     return ";".join(res)
 
 
-bib_df = (data.from_yml(f"{PROCESSED_DATA}/relevant")
+bib_df = (data.from_yml(f"{PROCESSED_DATA}")
     .assign(
         doi=lambda _df: _df["uri"].str.extract(r"https?://(?:dx\.)?doi\.org/(.*)", expand=False),
         zot_cited=lambda _df: _df["doi"].map(zot_df["cited"]),
diff --git a/src/data.py b/src/data.py
index d522ae2..460b96b 100644
--- a/src/data.py
+++ b/src/data.py
@@ -7,7 +7,7 @@ except ModuleNotFoundError:
     import load_yaml as yaml # for directly running the package
 from pandas import DataFrame, read_csv
 
-DEFAULT_YAML_PATH = Path("02-data/processed/relevant")
+DEFAULT_YAML_PATH = Path("02-data/processed")
 
 
 def to_tsv(studies: list[dict]) -> str: