Be explicit about datalad run inputs and outputs

Add validation routine to justfile
Validate CSV output schemas
2025-10-01 10:25:04 +02:00 · 2025-10-01 10:24:53 +02:00 · 2025-10-01 10:23:10 +02:00 · 2025-10-01 10:22:54 +02:00 · 2025-09-30 21:40:18 +02:00 · 2025-09-30 21:39:22 +02:00
38 changed files with 599 additions and 38 deletions
--- a/.gitattributes
+++ b/.gitattributes
@ -3,3 +3,5 @@
 CHANGELOG.md annex.largefiles=nothing
 README.md annex.largefiles=nothing
 justfile annex.largefiles=nothing
+.python-version annex.largefiles=nothing
+pyproject.toml annex.largefiles=nothing
--- a/.gitignore
+++ b/.gitignore
@ -0,0 +1,211 @@
+# Created by https://www.toptal.com/developers/gitignore/api/python,linux,vim
+# Edit at https://www.toptal.com/developers/gitignore?templates=python,linux,vim
+
+### Linux ###
+*~
+
+# temporary files which can be created if a process still has a handle open of a deleted file
+.fuse_hidden*
+
+# KDE directory preferences
+.directory
+
+# Linux trash folder which might appear on any partition or disk
+.Trash-*
+
+# .nfs files are created when an open file is removed but is still being accessed
+.nfs*
+
+### Python ###
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+cover/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+.pybuilder/
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
+#   intended to run in multiple environments; otherwise, check them in:
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# poetry
+#   Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#   https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
+#poetry.lock
+
+# pdm
+#   Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
+#pdm.lock
+#   pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it
+#   in version control.
+#   https://pdm.fming.dev/#use-with-ide
+.pdm.toml
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
+
+# Cython debug symbols
+cython_debug/
+
+# PyCharm
+#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+#.idea/
+
+### Python Patch ###
+# Poetry local configuration file - https://python-poetry.org/docs/configuration/#local-configuration
+poetry.toml
+
+# ruff
+.ruff_cache/
+
+# LSP config files
+pyrightconfig.json
+
+### Vim ###
+# Swap
+[._]*.s[a-v][a-z]
+!*.svg  # comment out if you don't need vector files
+[._]*.sw[a-p]
+[._]s[a-rt-v][a-z]
+[._]ss[a-gi-z]
+[._]sw[a-p]
+
+# Session
+Session.vim
+Sessionx.vim
+
+# Temporary
+.netrwhist
+# Auto-generated tag files
+tags
+# Persistent undo
+[._]*.un~
+
+# End of https://www.toptal.com/developers/gitignore/api/python,linux,vim
--- a/.python-version
+++ b/.python-version
@ -0,0 +1 @@
+3.12
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@ -0,0 +1,10 @@
+# CHANGELOG
+
+## 2025-09-30
+
+- Clean output data until 2025-09-24
+- Removal of 0-byte empty raw data files
+
+## 2025-09-29
+
+- Dirty output data until 2025-09-25
--- a/README.md
+++ b/README.md
@ -1,7 +1,57 @@
-# Project <insert name>
+# Project Popcorn Voidlinux
+
+Contains the gathered data of the <https://popcorn.voidlinux.org> statistics collection for all
+available dates (2025-09-24 as of today) in easier to work with CSV form.
+
+Data can be cleaned and processed with the available code.
+Any action can easily be started using [`just`](https://github.com/casey/just) with the available `justfile`.

 ## Dataset structure

- All inputs (i.e. building blocks from other sources) are located in
-  `inputs/`.
- All custom code is located in `code/`.
+- All inputs (i.e. building blocks from other sources) are located in `input/`.
+- All custom code is located in `src/`.
+- All final output data is located in `output/`
+
+## Output data structure
+
+### Files
+
+Represents information about the individual JSON files available in the raw dataset.
+
+Contained in `files.csv`, 4 columns:
+
+- `date`: the date a specific file is relevant for
+- `filename`: the full filename as it exists in the `input/` directory
+- `mtime`: the last modification time of the file on the system
+- `filesize`: the size of the file, in bytes
+
+### Kernels
+
+Represents information about the kernel versions represented in the raw dataset.
+
+Contained in `kernels.csv`, 3 columns:
+
+- `date`: the date a specific file is relevant for
+- `kernel`: the full kernel name that is available in the raw data, including major version, minor
+          version and suffix
+- `downloads`: the amount of times the kernel has been seen on the observation date
+
+### Packages
+
+Represents information about the package versions represented in the raw dataset.
+
+Contained in `packages.csv`, 4 columns:
+
+- `date`: the date a specific file is relevant for
+- `package`: the full package name as it is available in the raw data
+- `version`: the full package version as it is available in the raw data
+- `count`: the amount of times the package and version combination has been seen on the observation date
+
+### Unique installs
+
+Represents information about the unique system installations represented in the raw dataset.
+
+Contained in `unique_installs.csv`, 2 columns:
+
+- `date`: the date a specific file is relevant for
+- `unique`: the amount of unique installations counted on the observation date
--- a/code/README.md
+++ b/code/README.md
@ -1,3 +0,0 @@
-All custom code goes into this directory. All scripts should be written such
-that they can be executed from the root of the dataset, and are only using
-relative paths for portability.
--- a/input/2018-11-07.json
+++ b/input/2018-11-07.json
@ -1 +0,0 @@
-../.git/annex/objects/fm/24/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json
--- a/input/2018-11-09.json
+++ b/input/2018-11-09.json
@ -1 +0,0 @@
-../.git/annex/objects/fm/24/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json
--- a/input/2019-01-21.json
+++ b/input/2019-01-21.json
@ -1 +0,0 @@
-../.git/annex/objects/fm/24/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json
--- a/input/2019-01-23.json
+++ b/input/2019-01-23.json
@ -1 +0,0 @@
-../.git/annex/objects/fm/24/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json
--- a/input/2019-01-28.json
+++ b/input/2019-01-28.json
@ -1 +0,0 @@
-../.git/annex/objects/fm/24/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json
--- a/input/2019-01-30.json
+++ b/input/2019-01-30.json
@ -1 +0,0 @@
-../.git/annex/objects/fm/24/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json
--- a/input/2019-01-31.json
+++ b/input/2019-01-31.json
@ -1 +0,0 @@
-../.git/annex/objects/fm/24/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json
--- a/input/2019-07-06.json
+++ b/input/2019-07-06.json
@ -1 +0,0 @@
-../.git/annex/objects/fm/24/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json
--- a/input/2022-06-15.json
+++ b/input/2022-06-15.json
@ -1 +0,0 @@
-../.git/annex/objects/fm/24/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json
--- a/input/2024-07-03.json
+++ b/input/2024-07-03.json
@ -1 +0,0 @@
-../.git/annex/objects/fm/24/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json
--- a/input/2025-01-15.json
+++ b/input/2025-01-15.json
@ -1 +0,0 @@
-../.git/annex/objects/fm/24/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json
--- a/input/2025-01-22.json
+++ b/input/2025-01-22.json
@ -1 +0,0 @@
-../.git/annex/objects/fm/24/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json
--- a/input/2025-03-13.json
+++ b/input/2025-03-13.json
@ -1 +0,0 @@
-../.git/annex/objects/fm/24/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json
--- a/input/2025-05-26.json
+++ b/input/2025-05-26.json
@ -1 +0,0 @@
-../.git/annex/objects/fm/24/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json
--- a/input/2025-07-28.json
+++ b/input/2025-07-28.json
@ -1 +0,0 @@
-../.git/annex/objects/fm/24/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json
--- a/input/2025-09-25.json
+++ b/input/2025-09-25.json
@ -1 +0,0 @@
-../.git/annex/objects/fm/24/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json/MD5E-s0--d41d8cd98f00b204e9800998ecf8427e.json
--- a/20
+++ b/20
@ -1,13 +1,23 @@
-default: files kernels unique packages
+default: versioned validate
+
+all: files kernels unique packages

 files:
-    python code/files.py input output
+    python src/files.py input output

 kernels:
-    python code/kernels.py input output
+    python src/kernels.py input output

 unique:
-    python code/unique.py input output
+    python src/unique.py input output

 packages:
-    python code/packages.py input output
+    python src/packages.py input output
+
+versioned:
+    datalad run -m "Create updated output data" -i "input/*.json" -o "output/*.csv" just all
+    printf "\n## %s\n\n- auto generated\n" $(date +%F) | sed -i '/CHANGELOG/r /dev/stdin' CHANGELOG.md
+
+# requires python dependencies, thus to be running in venv
+validate:
+    uv run pytest
--- a/output/files.csv
+++ b/output/files.csv
@ -1 +1 @@
-../.git/annex/objects/84/5J/MD5E-s144471--7ffa8c5e2554bd2017ec2b3efd79e61d.csv/MD5E-s144471--7ffa8c5e2554bd2017ec2b3efd79e61d.csv
+../.git/annex/objects/5g/QF/MD5E-s143687--a8cd063146eb3003968900a3b7aff0e8.csv/MD5E-s143687--a8cd063146eb3003968900a3b7aff0e8.csv
--- a/pyproject.toml
+++ b/pyproject.toml
@ -0,0 +1,13 @@
+[project]
+name = "popcorn-dataset"
+version = "0.1.0"
+description = "A full CSV representation of the Voidlinux popcorn data"
+readme = "README.md"
+requires-python = ">=3.12"
+dependencies = []
+
+[dependency-groups]
+dev = [
+    "dataframely>=1.13.0",
+    "pytest>=8.4.2",
+]
--- a/code/.gitattributes
+++ b/code/.gitattributes
--- a/src/README.md
+++ b/src/README.md
@ -0,0 +1,12 @@
+# Popcorn dataset code
+
+Each script can be run stand-alone like `python src/files.py <input-dir> <output-dir>`,
+exchanging the script file for the one intended.
+
+It is suggested, however, to run the scripts using the `just` command runner from the
+dataset root, such as `just files` for the same effect as above.
+This will automatically populate the correct input and output directories.
+
+To create new `datalad` versioned output data, run `just versioned` or `just` without any arguments.
+A new commit containing the updated data will be created,
+and an automatic entry in the CHANGELOG made.
--- a/code/files.py
+++ b/code/files.py
@ -1,6 +1,4 @@
 import csv
-from collections.abc import Generator
-from datetime import datetime
 from pathlib import Path


@ -29,7 +27,6 @@ def main(input: str, output: str) -> None:
    input_dir = Path(input)
    output_dir = Path(output)
    ensure_dirs(input_dir, output_dir)
-
    filesize_csv(input_dir, output_dir)


--- a/code/kernels.py
+++ b/code/kernels.py
@ -1,7 +1,5 @@
 import csv
 import json
-from collections.abc import Generator
-from datetime import datetime
 from pathlib import Path
 from typing import Any, cast

@ -33,7 +31,6 @@ def package_kernel_csv(input_dir: Path, output_dir: Path) -> None:
                    p_count = cast(int, data["XuKernel"][entry])
                    p_date = date
                    writer.writerow([p_date, p_name, p_count])
-                    # print(output_file, p_date, p_name, p_count)


 def ensure_dirs(input_dir: Path, output_dir: Path):
@ -46,9 +43,6 @@ def main(input: str, output: str) -> None:
    input_dir = Path(input)
    output_dir = Path(output)
    ensure_dirs(input_dir, output_dir)
-    # json_to_daily_pkg(Path(input) / "daily", Path(output) / "daily", force=True)
-    # json_to_unique_csv(Path(input) / "daily", Path(output), force=True)
-
    package_kernel_csv(input_dir, output_dir)


--- a/code/packages.py
+++ b/code/packages.py
--- a/src/tests/init.py
+++ b/src/tests/init.py
--- a/src/tests/test_validate_date_col.py
+++ b/src/tests/test_validate_date_col.py
@ -0,0 +1,10 @@
+import dataframely as dy
+import polars as pl
+
+
+class DateSchema(dy.Schema):
+    date: dy.Date = dy.Date(nullable=False)
+
+    @dy.rule()
+    def minimum_starting_date() -> pl.Expr:
+        return pl.col("date") > pl.date(2018, 5, 8)
--- a/src/tests/test_validate_files.py
+++ b/src/tests/test_validate_files.py
@ -0,0 +1,24 @@
+import dataframely as dy
+import polars as pl
+
+from tests.test_validate_date_col import DateSchema
+
+
+class FilesSchema(DateSchema):
+    filename: dy.String = dy.String(nullable=False)
+    mtime: dy.Float = dy.Float(nullable=False)
+    filesize: dy.Integer = dy.Integer(nullable=False)
+
+
+def test_files_schema():
+    _ = FilesSchema.validate(
+        pl.scan_csv(
+            "output/files.csv",
+            schema={
+                "date": pl.Date,
+                "filename": pl.String,
+                "mtime": pl.Float32,
+                "filesize": pl.UInt32,
+            },
+        ).collect(engine="streaming")
+    )
--- a/src/tests/test_validate_kernels.py
+++ b/src/tests/test_validate_kernels.py
@ -0,0 +1,22 @@
+import dataframely as dy
+import polars as pl
+
+from tests.test_validate_date_col import DateSchema
+
+
+class KernelsSchema(DateSchema):
+    kernel: dy.String = dy.String(nullable=False)
+    downloads: dy.Integer = dy.Integer(nullable=False)
+
+
+def test_kernels_schema():
+    _ = KernelsSchema.validate(
+        pl.scan_csv(
+            "output/kernels.csv",
+            schema={
+                "date": pl.Date,
+                "kernel": pl.String,
+                "downloads": pl.UInt32,
+            },
+        ).collect(engine="streaming")
+    )
--- a/src/tests/test_validate_packages.py
+++ b/src/tests/test_validate_packages.py
@ -0,0 +1,24 @@
+import dataframely as dy
+import polars as pl
+
+from tests.test_validate_date_col import DateSchema
+
+
+class PackagesSchema(DateSchema):
+    package: dy.String = dy.String(nullable=False)
+    version: dy.String = dy.String(nullable=False)
+    count: dy.Integer = dy.Integer(nullable=False)
+
+
+def test_packages_schema():
+    _ = PackagesSchema.validate(
+        pl.scan_csv(
+            "output/packages.csv",
+            schema={
+                "date": pl.Date,
+                "package": pl.String,
+                "version": pl.String,
+                "count": pl.UInt16,
+            },
+        ).collect(engine="streaming")
+    )
--- a/src/tests/test_validate_unique_installs.py
+++ b/src/tests/test_validate_unique_installs.py
@ -0,0 +1,24 @@
+import dataframely as dy
+import polars as pl
+
+from tests.test_validate_date_col import DateSchema
+
+
+class UniquesSchema(DateSchema):
+    unique: dy.Integer = dy.Integer(nullable=False)
+
+    @dy.rule()
+    def cannot_be_zero() -> pl.Expr:
+        return pl.col("unique") > 0
+
+
+def test_uniques_schema():
+    _ = UniquesSchema.validate(
+        pl.scan_csv(
+            "output/unique_installs.csv",
+            schema={
+                "date": pl.Date,
+                "unique": pl.UInt16,
+            },
+        ).collect(engine="streaming")
+    )
--- a/code/unique.py
+++ b/code/unique.py
--- a/uv.lock
+++ b/uv.lock
@ -0,0 +1,176 @@
+version = 1
+revision = 3
+requires-python = ">=3.12"
+
+[[package]]
+name = "colorama"
+version = "0.4.6"
+source = { registry = "https://pypi.org/simple" }
+sdist = { url = "https://files.pythonhosted.org/packages/d8/53/6f443c9a4a8358a93a6792e2acffb9d9d5cb0a5cfd8802644b7b1c9a02e4/colorama-0.4.6.tar.gz", hash = "sha256:08695f5cb7ed6e0531a20572697297273c47b8cae5a63ffc6d6ed5c201be6e44", size = 27697, upload-time = "2022-10-25T02:36:22.414Z" }
+wheels = [
+    { url = "https://files.pythonhosted.org/packages/d1/d6/3965ed04c63042e047cb6a3e6ed1a63a35087b6a609aa3a15ed8ac56c221/colorama-0.4.6-py2.py3-none-any.whl", hash = "sha256:4f1d9991f5acc0ca119f9d443620b77f9d6b33703e51011c16baf57afb285fc6", size = 25335, upload-time = "2022-10-25T02:36:20.889Z" },
+]
+
+[[package]]
+name = "dataframely"
+version = "1.13.0"
+source = { registry = "https://pypi.org/simple" }
+dependencies = [
+    { name = "numpy" },
+    { name = "polars" },
+]
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Author	SHA1	Message	Date
Marty Oehme	8ef21489a3	Be explicit about datalad run inputs and outputs	2025-10-01 10:25:04 +02:00
Marty Oehme	75586854de	Add validation routine to justfile	2025-10-01 10:24:53 +02:00
Marty Oehme	2faeda87c3	Validate CSV output schemas Also moved code dir to src. There are reasons to do standard things in standard ways. While it is possible to get the `code/` directory to work, and recognize it as a package path, this requires wrangling the pyproject.toml file. Additionally, any import from the `code.something` path automatically shadows the python stdlib `code` module. While it may not be necessary, it still is good to not shadow standard library modules.	2025-10-01 10:23:10 +02:00
Marty Oehme	de96b67fac	Add validation dependencies to venv	2025-10-01 10:22:54 +02:00
Marty Oehme	7ceeb11b42	Add uv skeleton	2025-09-30 21:40:18 +02:00
Marty Oehme	42e706080a	Add code README and automatic CHANGELOG entries	2025-09-30 21:39:22 +02:00
Marty Oehme	fbba2d2992	Update README.md and CHANGELOG.md	2025-09-30 21:13:19 +02:00
Marty Oehme	3beb496680	Update justfile with versioned run	2025-09-30 20:58:36 +02:00
Marty Oehme	3e084abbc1	[DATALAD RUNCMD] Create updated output data === Do not change lines below === { "chain": [], "cmd": "just", "dsid": "186d720c-0862-453d-8b94-5140f0d67d2e", "exit": 0, "extra_inputs": [], "inputs": [ "input/" ], "outputs": [ "output/" ], "pwd": "." } ^^^ Do not change lines above ^^^	2025-09-30 20:53:50 +02:00
Marty Oehme	5525debd8d	Remove empty raw 0byte files	2025-09-30 20:45:29 +02:00
				`@ -1 +0,0 @@`
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